Gene Information

Name : Bpro_3997 (Bpro_3997)
Accession : YP_550789.1
Strain : Polaromonas sp. JS666
Genome accession: NC_007948
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 4192850 - 4194130 bp
Length : 1281 bp
Strand : -
Note : -

DNA sequence : 
ATGCAAAGTACTTCTCTTGCCCGCACTGTCGCCATCATCGGCCTGGGCTACGTAGGCCTGCCCCTGGCCGTTGAGTTTGG
TAAAAAACGCAAGGTTGTGGGCTTTGACATCAGCGCTGCTCGGGTGGCCGAACTTCAGGCAGGGCAAGACCACACGCTGG
AGGTGGAGCCCGAGCAAATGCGCAAGGCCGTGCACCTGCAGTACACCACCGACCCCGCCGCCCTGCAAGGCTGTGACCTG
TTCATCGTCACCGTGCCCACCCCCATCGACGAATACAAACGCCCCGATCTGACGCCCCTCATCAAGGCCAGTACCACCAT
AGGCAAGGTGCTGAAGAAGGGCGACATCGTCATTTACGAATCTACCGTCTACCCCGGCGCTACCGAGGAGGACTGCGTGC
CCGTGCTGGAGCAGTACTCGGGGCTGAAATTCAATGTCGATTTTTTTGCAGGCTATTCGCCGGAGCGCGTGAACCCGGGT
GACAAGACCCATCGCGTTACCACCATCAAAAAAGTCACGTCCGGCTCCACCCCCGAGGTGGCCGACCTGGTGGATGCGCT
CTACAACGAAATCGTGACTGTTGGCACCCACAAGGCCCCCAGCATCAGGGTGGCCGAGGCGGCCAAGGTGATTGAGAACA
CCCAGCGTGATGTCAACATCGCGCTCATTAATGAACTGGCGCTTATTTTCAACAGGCTCGGCATAGACACCGAAGCCGTG
CTGCAGGCGGCAGGCACCAAGTGGAACTTTTTGCCATTCCGCCCCGGCCTGGTGGGCGGGCACTGCATTGGCGTGGACCC
GTACTACCTCACGCACAAGGCCGAGGCCATTGGCTATCACCCCGAAATCATCCTCGCCGGCCGCCGCCTGAACGACAGCA
TGGGCGCCTACGTGGTCACCCAGCTCGTCAAGGCCATGACAAAGCGCCGCATCCACGTGCGGGGCGCCCGCGTGCTGGTG
ATGGGCCTGGCCTTCAAGGAAAACTGCCCAGACCTGCGCAACACCCGCGTGGTAGACATCGTGCGGGAGCTCACCGACTA
CGACGTGCAAGCCGATGTGCACGACCCCTGGGTTTCGGTCGAAGAGGCGCAGCTCGAATACGGCATCACCCCGGTGCGGC
AGCCTGAAGGCGGAACTTACGACGCCATCATCGTCGCCGTGGCGCACGAGCAGTTCAAGGCCATGGGCGCCGCTGCCTTT
CGTGCCTTGGGTAAGCCCGAGCACGTGTTGTTTGACCTGAAGTACGTGCTGACGGCGTCTGAGAGCGACCTGCGGTTATG
A

Protein sequence : 
MQSTSLARTVAIIGLGYVGLPLAVEFGKKRKVVGFDISAARVAELQAGQDHTLEVEPEQMRKAVHLQYTTDPAALQGCDL
FIVTVPTPIDEYKRPDLTPLIKASTTIGKVLKKGDIVIYESTVYPGATEEDCVPVLEQYSGLKFNVDFFAGYSPERVNPG
DKTHRVTTIKKVTSGSTPEVADLVDALYNEIVTVGTHKAPSIRVAEAAKVIENTQRDVNIALINELALIFNRLGIDTEAV
LQAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAEAIGYHPEIILAGRRLNDSMGAYVVTQLVKAMTKRRIHVRGARVLV
MGLAFKENCPDLRNTRVVDIVRELTDYDVQADVHDPWVSVEEAQLEYGITPVRQPEGGTYDAIIVAVAHEQFKAMGAAAF
RALGKPEHVLFDLKYVLTASESDLRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-143 66
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-143 66
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-113 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bpro_3997 YP_550789.1 UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 5e-144 66