|
Name : Bpro_3996 (Bpro_3996) Accession : YP_550788.1 Strain : Polaromonas sp. JS666 Genome accession: NC_007948 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 4191619 - 4192728 bp Length : 1110 bp Strand : - Note : - DNA sequence : ATGACCGCATACGAACAACTCCAGATTCGCCTGAAGAGCGAGCCCCGTGCCTGGCTCGTCACTGGGGTTGCCGGCTTTAT TGGCAGCAATCTGCTGGAAGCTCTGCTCAAGCTGGGCCAGCGCGTGGTCGGACTGGACAACTTTGCCACCGGCTACCAGC GCAACCTGGACGAAGTGCAAACGCTGGTCTCTCCTGAGCAGTGGGCCAATTTCCACTTCATTGAGGGCGACATCCGTAAC CTGCCCGATTGCCAGCGTGCCATGTCTTGGCCCCCTCTCCCCACGGAAGACGGTAGGGGTGAGGGCTCTCCCGTCGACTA CGTCCTTCACCAGGCAGCCCTGGGCAGCGTGCCCCGGTCACTGGCCGATCCCATCACCACCAACGCCGCCAACATCACGG GTTTCCTGAACATGCTGGTGGCCGCACGCGACGCCGGGGTCAAAAGCTTTACCTACGCCGCCAGCAGCAGCACCTACGGG GATCACCCGGCTCTGCCCAAGGTAGAGCACACCATCGGCAAACCGCTCAGCCCCTATGCGGTGACCAAATATGTGAACGA GCTGTATGCCGAGGTATTTGCCCGCTGCTACGGCTTTAACACCATAGGTTTGCGCTACTTCAATGTGTTTGGTGCACGGC AAAATCCCAGTGGGGCCTATGCCGCTGTGATCCCGAAATGGACCGCAGCGATGATGAAAGGGGAAGACGTGTTCATCAAC GGCGATGGTGAAACCAGCCGGGACTTCTGCTACGTGGCCAACGCGGTGCAAGCCAACCTGTTGGCGGCGACCGTGAGTGA TCTCCCTCTCCCCCTGGAAGAGGGCGGGGGTGAGGGCTCTCCTACCAACCAGGTGTACAACGTGGCCGTGGGTGATCGCA CTACGCTGAACACCCTGTTTGGCCTGATACGTGACAACTTGATTGCACGTGGCGTGCCTGTCAGTACCGAGCCCAAGTAT CGGGATTTCCGTGCGGGCGACGTGCGTAACAGCCTGGCCGACATCGGCAAGGCCCATCGGATGCTGGGTTACGCCCCTAC CCATCGCATAGACCAGGGATTGCAGTTGGCGATTCCTTGGTATGTCCAGAACTGCAAGGTTTCATCATGA Protein sequence : MTAYEQLQIRLKSEPRAWLVTGVAGFIGSNLLEALLKLGQRVVGLDNFATGYQRNLDEVQTLVSPEQWANFHFIEGDIRN LPDCQRAMSWPPLPTEDGRGEGSPVDYVLHQAALGSVPRSLADPITTNAANITGFLNMLVAARDAGVKSFTYAASSSTYG DHPALPKVEHTIGKPLSPYAVTKYVNELYAEVFARCYGFNTIGLRYFNVFGARQNPSGAYAAVIPKWTAAMMKGEDVFIN GDGETSRDFCYVANAVQANLLAATVSDLPLPLEEGGGEGSPTNQVYNVAVGDRTTLNTLFGLIRDNLIARGVPVSTEPKY RDFRAGDVRNSLADIGKAHRMLGYAPTHRIDQGLQLAIPWYVQNCKVSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviC | NP_458739.1 | Vi polysaccharide biosynthesis protein, epimerase | Virulence | SPI-7 | Protein | 3e-99 | 62 |
| tviC | NP_807944.1 | VI polysaccharide biosynthesis epimerase | Virulence | SPI-7 | Protein | 3e-99 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Bpro_3996 | YP_550788.1 | NAD-dependent epimerase/dehydratase | VFG0430 | Protein | 1e-99 | 62 |
