Gene Information

Name : Bpro_3985 (Bpro_3985)
Accession : YP_550777.1
Strain : Polaromonas sp. JS666
Genome accession: NC_007948
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 4178964 - 4179524 bp
Length : 561 bp
Strand : -
Note : -

DNA sequence :
GTGAAGCGTCTGTTTGATTTGGTGCTGGCCCTGTGCGCCGCCGTGATTCTGCTGCTGCCATTAATGGTGGTGGCCCTGGC
GGTGCGCCTGACTTCGCCGGGGCCGGTCCTGTACTGGTCAGACCGGGTGGGCAAGGGCAACAGGATTTTCAAAATGCCCA
AATTTCGCAGCATGCGAATGGGCACGCCGGCTGTGGCCACGCATCTGCTGGAGGACCCCAAGGCCTATCTCACGCCCATA
GGTTCTTTTCTTCGAAAAAGCAGCCTGGACGAGTTACCGCAGTTGTGGAGCATTATCAGGGGCGATATGAGTTTTGTCGG
GCCCCGGCCCGCGTTGTTTAATCAGCATGATTTGATTGCCCTGCGTACCCAATATGGTGTGGATAAGCTCCTTCCCGGCT
TGACGGGCTGGGCTCAGGTGAATGGGCGGGACGAATTACCCGTTTTCCAAAAGGTCCAGCTTGATACCGAATACGTGCGG
CGCCAGTCGCTGTTTTTTGATATGAAGATAATCGGCCTGACTTTCTACCGGGTGATCAGGCGGGACAGTATTACCCATTA
A

Protein sequence :
MKRLFDLVLALCAAVILLLPLMVVALAVRLTSPGPVLYWSDRVGKGNRIFKMPKFRSMRMGTPAVATHLLEDPKAYLTPI
GSFLRKSSLDELPQLWSIIRGDMSFVGPRPALFNQHDLIALRTQYGVDKLLPGLTGWAQVNGRDELPVFQKVQLDTEYVR
RQSLFFDMKIIGLTFYRVIRRDSITH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 2e-28 53
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-29 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bpro_3985 YP_550777.1 sugar transferase VFG1369 Protein 5e-28 50
Bpro_3985 YP_550777.1 sugar transferase VFG1309 Protein 2e-28 45