Gene Information

Name : lspA (Bpro_3850)
Accession : YP_550646.1
Strain : Polaromonas sp. JS666
Genome accession: NC_007948
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 4042877 - 4043371 bp
Length : 495 bp
Strand : +
Note : lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis

DNA sequence :
ATGGCCAAGGCTTTCGGAAAAACCTCGGGTTCCATGCTGCCCTGGCTGGGGCTGGCACTGATTCTGCTAATTGCCGACCA
GTTCACCAAGGTGCTGATCCTGGGCTATTACCGCCTGGGCGATGCCACCTATGTGACCAGTTTCTTCAATGTGGTGCGGG
TTCACAACACCGGCGCCGCGTTTTCCTTTCTGGCCTCAGCGTCGGGCTGGCAGCGCTGGTTTTTTACCGGTCTTGGTATT
GCCGCAGCGGTCTTCATTGTGTGGCTGCTCAGGTCTCATGCCGGGCAAAAGCTGTTTTCGTTCGCGCTGGCCTGCATCCT
GGGCGGTGCAGTCGGCAACGTGATCGACCGCACCCTGCACGGCTACGTGGTGGACTTTCTGGACTTCCACTACGGCAACT
GGCATTTTCCGGCCTTCAACATCGCCGACAGCGCCATCACCATTGGCGCGATTTTTCTGGTGCTGGACGAGTTGCGGCGC
GTGCGCAGAAGTTGA

Protein sequence :
MAKAFGKTSGSMLPWLGLALILLIADQFTKVLILGYYRLGDATYVTSFFNVVRVHNTGAAFSFLASASGWQRWFFTGLGI
AAAVFIVWLLRSHAGQKLFSFALACILGGAVGNVIDRTLHGYVVDFLDFHYGNWHFPAFNIADSAITIGAIFLVLDELRR
VRRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 3e-14 50
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 3e-14 50
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 2e-14 50
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 2e-14 50
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 2e-14 50
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 1e-16 49