Gene Information

Name : Bpro_0037 (Bpro_0037)
Accession : YP_546902.1
Strain : Polaromonas sp. JS666
Genome accession: NC_007948
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 39663 - 41579 bp
Length : 1917 bp
Strand : +
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGGCCAAAACCCGCCTCACCGTTGACACCAACGACCTCGCAAGCCGTATCACGCGCGCGCCTTTTCCCGGTTCCGCCAA
AATTTATATCGAGGGTTCGCGCCCCGACATCCGCGTGCCGTTTCGCGAGGTCACGCTGACCGACACGATGGTGCACGAGG
GGGCGGGCGAGCCGCGCCGCGAAGCCAATCCGCCGCTGCGCCTGTATGACGCCTCGGGCGTCTACACCGACCCGGCGTCG
CCGATCGACATCACGCGCGGCTTGCCGCCTTTGCGCGGCGCCTGGATCAATGAGCGCGCCGACACCGAAGCGCTGCCCGG
CATCAGCAGCGCCTATGGCCGCGAGCGCCTGAACGACCCGGCGCTGGCCGCCCTGCGCATGGCGCATGCGCCCGTGCCGC
GCCGCGCCAAGGCCGGTGCCAACGTCTCGCAAATGCATTACGCCCGCAAAGGCATCATCACGCCGGAGATGGAATACATC
GCGGTGCGCGAAAACCTGGTGCGCGCGCAGCTGGCCGAGCGCCTGGCGACCGAGCGCATGCCGAAGAAAGGGCACTCCTT
CAACGCCTCGATTCCGGAACAGATCACCGCTGAATTTGTGCGTGATGAAGTGGCGCGCGGCCGCGCCGTGATTCCGAACA
ACATCAACCACCCCGAGAGCGAGCCGATGATCATCGGCCGCAATTTCCTGATCAAGGTCAATGCCAACATCGGCAACTCG
GCCGTGACGTCTTCCATCGAGGAAGAGGTGGACAAGCTGGTCTGGTCGATCCGCTGGGGCGCCGACACCGTGATGGACCT
GTCGACCGGCGAGAACATCCACGAGACGCGCGAATGGATTCTGCGCAACTCGCCGGTGCCGATCGGCACGGTGCCGATTT
ACCAGGCGCTGGAAAAAGTCAACGGCAAGGCCGAAGACCTGACCTGGGAAATCTTCCGCGACACGCTGATCGAGCAGGCC
GAGCAGGGCGTGGACTACTTCACCATCCACGCCGGTGTGCGCCTGGCCTATGTGCCGCTGACCGCCAACCGCCTGACGGG
CATCGTCTCGCGCGGCGGCTCCATCATGGCCAAGTGGTGTTTGTCGCACCACAAGGAAAGCTTTTTGTACGAGCGCTTTG
ACGAGATCTGCGAGATCATGAAGGCCTACGACGTGTGCTTCTCGCTGGGCGACGGTCTGCGGCCCGGCTCGATTGCCGAT
GCCAATGACGAAGCGCAGTTTGCCGAGCTGCACACGCTGGGCGAACTCACGCAGATCGCCTGGAAACATGATGTGCAGGT
GATGATCGAAGGCCCTGGCCATGTGCCGCTGCAGCTGGTGAAGGAAAACGTCGACAAGCAGCTCGAGGCTTGTTTTGAGG
CGCCGTTCTACACGCTGGGCCCGCTGATCACCGACATCTCGCCGGGCTACGACCATATTTCTTCCGCGATGGGCGCGGCC
AACATCGGCTGGTATGGCACAGCCATGCTCTGCTACGTGACGCCGAAGGAGCACCTCGGGCTGCCAAACCGCGACGACGT
GAAGCAGGGCCTGATCGCCTACAAGATTGCGGCCCACGCGGGCGACCTGGCCAAGGGCTACCCGGGCGCGCAGATGTGGG
ACAACGCGGTGTCCAAGGCGCGCTTCGAGTTCCGCTGGGAAGACCAGTTCCGCCTGGCGATCGACCCGGACACGGCCATG
GCCTACCACGACGAAACCCTGCCGAAGGAAAACGCCAAGGTGGCGCATTTCTGTTCGATGTGCGGACCGAAGTTCTGTTC
GATGAAGATCTCGCAGGAAGTGCGCGAGTTTGCAAGGCTCAATCCGGCCAGCACCACGCTGGCCGCGCCGGGCGTGATTG
CGATCAAGCAGATCGACAGCGGATTCGAGGAAAAGGCGAAAGAGTTTCGTGAAGGTGGCAGTGAGATTTATTCTTGA

Protein sequence :
MAKTRLTVDTNDLASRITRAPFPGSAKIYIEGSRPDIRVPFREVTLTDTMVHEGAGEPRREANPPLRLYDASGVYTDPAS
PIDITRGLPPLRGAWINERADTEALPGISSAYGRERLNDPALAALRMAHAPVPRRAKAGANVSQMHYARKGIITPEMEYI
AVRENLVRAQLAERLATERMPKKGHSFNASIPEQITAEFVRDEVARGRAVIPNNINHPESEPMIIGRNFLIKVNANIGNS
AVTSSIEEEVDKLVWSIRWGADTVMDLSTGENIHETREWILRNSPVPIGTVPIYQALEKVNGKAEDLTWEIFRDTLIEQA
EQGVDYFTIHAGVRLAYVPLTANRLTGIVSRGGSIMAKWCLSHHKESFLYERFDEICEIMKAYDVCFSLGDGLRPGSIAD
ANDEAQFAELHTLGELTQIAWKHDVQVMIEGPGHVPLQLVKENVDKQLEACFEAPFYTLGPLITDISPGYDHISSAMGAA
NIGWYGTAMLCYVTPKEHLGLPNRDDVKQGLIAYKIAAHAGDLAKGYPGAQMWDNAVSKARFEFRWEDQFRLAIDPDTAM
AYHDETLPKENAKVAHFCSMCGPKFCSMKISQEVREFARLNPASTTLAAPGVIAIKQIDSGFEEKAKEFREGGSEIYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 68
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 68
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 68