Gene Information

Name : hemC (Bpro_3664)
Accession : YP_550464.1
Strain : Polaromonas sp. JS666
Genome accession: NC_007948
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 3865187 - 3866191 bp
Length : 1005 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
GTGTCTGCAGCGTCTCAACCCGGCAACCCGATTGCCCCCCGCAAAATCATCATTGCCACGCGCGAAAGCCGGCTGGCGCT
GTGGCAGGCCGAGCATGTCAAGGCGCTGCTCGAATCCCGCCTGGGCTGGCAGGTGGAACTGCTGGGCATGACGACCCAGG
GCGACCAGATCCTGGACCGCTCGTTGAGCAAGGTCGGTGGCAAGGGGCTGTTCGTCAAGGAGCTGGAAGTGGCCCTCAGC
GAAGGCCGGGCCGACCTGGCCGTGCATTCGCTCAAGGATGTACCCATGGACCTGCCCGACGGATTTGCGCTGGCCTGTGT
GCTGGAGCGCGAAGATCCGCACGACGCTTTCGTGTCCAACCAGTTTGCCTCGCTGGCCGACCTCCCGCAGGGCGCGGTGG
TCGGAACCTCCAGCCTGCGCCGGCTGGTGCTGCTCAAGGCGCTGCGGCCCGATCTGAACATCGAGCCCTTGCGCGGCAAC
CTCGACACGCGCCTGCGCAAGCTCGACGAGGGCCACTACCACGCCATCGTGCTGGCGGCGGCCGGGCTCAAGCGCCTGGG
CCTTCAGGCGCGCATTCGCGGCATCTTTGCGCCCGACGACATGTTGCCGGCTGCGGGGCAGGGCGCCCTGGGCATCGAGG
TGCGGGCCGACCGCCATGATTTGATGCAGGCCCTGGGCACGCTGGCCCATCAGCCGACGTGGCTGGCGGTGACGGCTGAG
CGCACCGTCTCGCGCGCCATGGGTGGCAGCTGCTCCATGCCGCTGGCCGCCTACACCGAAGGCCCGGCGGCAGAAGGCTC
AGAAGGCATGCAACTGCACGCGACCTGGGGCGATCCGGCTACCGCCGACGCGCCGGCCGGCCAGCCGCTGGCTCCGCTGG
TGCGGGTGCAAAAAACCGCGGTGGTGCGCAGTTTTGCCGAAGCCGAGGCGCTTGGCGAAGCGGTCGCGGCGCAGCTGCGT
GCTGGCGGCGCGGTCTGGGCTAGCAACACCCCTTCCGATACCTGA

Protein sequence :
MSAASQPGNPIAPRKIIIATRESRLALWQAEHVKALLESRLGWQVELLGMTTQGDQILDRSLSKVGGKGLFVKELEVALS
EGRADLAVHSLKDVPMDLPDGFALACVLEREDPHDAFVSNQFASLADLPQGAVVGTSSLRRLVLLKALRPDLNIEPLRGN
LDTRLRKLDEGHYHAIVLAAAGLKRLGLQARIRGIFAPDDMLPAAGQGALGIEVRADRHDLMQALGTLAHQPTWLAVTAE
RTVSRAMGGSCSMPLAAYTEGPAAEGSEGMQLHATWGDPATADAPAGQPLAPLVRVQKTAVVRSFAEAEALGEAVAAQLR
AGGAVWASNTPSDT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 6e-62 59
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 6e-62 59