Gene Information

Name : Bpro_2415 (Bpro_2415)
Accession : YP_549232.1
Strain : Polaromonas sp. JS666
Genome accession: NC_007948
Putative virulence/resistance : Virulence
Product : ornithine decarboxylase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1982
EC number : 4.1.1.17
Position : 2512662 - 2514956 bp
Length : 2295 bp
Strand : +
Note : -

DNA sequence :
ATGAAATTCCGCTTTCCGATTGTGATCATTGACGAAGACTTCCGCTCCGAGAATACCTCGGGGCTGAGTATTCGTGCGCT
GGCCCAGGCCATTGAAAGCGAAGGCTTCGAGGTGCTGGGCGTGACCAGCTACGGTGACCTGTCGCAGTTCGCCCAGCAGC
AAAGTCGTGCCAGTGCTTTTATCCTGTCAATTGATGACGAGGAGTTCACACCCGGCCCGGATCTGGATCCGGCCGTGCTG
AATCTGCGCAACTTCATCGAGGAGGTACGCCGCAAGAATCTTGACGTGCCGATTTACGTCTACGGTGAAACCAAAACCTC
GCGGCATATTCCCAACGACATCCTGCGCGAGTTGCACGGCTTCATTCACATGTTTGAAGACACGCCCGAGTTTGTGGCGC
GCCACATCCTTCGTGAGGCCAAGAGCTACCTCGAAGGGGTGCAGCCGCCTTTCTTCAAGGCGCTGCTGGACTACGCCGAA
GACGGCTCGTACTCATGGCACTGCCCGGGTCACTCGGGTGGTGTGGCATTTTTGAAGAGCCCGGTCGGGCAGATGTTTCA
CCAGTTCTTCGGCGAGAACATGCTGCGTGCCGACGTATGCAATGCAGTCGAGGAGTTGGGCCAACTGCTCGACCATGACG
GCGCGATTGGCGCCAGCGAGCGCAATGCCGCGCGTATCTTCAATGCGGACCACTGTTTCTTCGTCACTAACGGCACCTCC
ACCAGCAACAAGATGGTGTGGCACCACACCGTGGCGCCGGGCGATGTGGTGGTGGTGGACCGGAACTGCCACAAATCCAT
TCTGCACGCCATCATCATGACGGGTGCGATCCCGGTGTTTTTGAAGCCAACGCGCAACCACTTCGGCATCATCGGCCCGA
TTCCGCAAAGCGAATTCGAGCCCGAAGCCATCAAGGCCAAGATCCGGGCCAACCCGCTGCTCAAGGGTGTCGATGCAGAC
AAGGTCAAGCCGCGCGTGCTCACGCTCACGCAGTCGACCTATGACGGCGTGCTCTACAACACCGAAACCATCAAGGGCAT
GCTCGATGGCTACGTGGACAACCTGCACTTCGACGAGGCCTGGCTGCCGCACGCTGCATTTCACCCCTTCTATGGCAGCT
ACCACGCCATGGGCAAAAACCGCATTCGCCCGAAAAATGCCGTGGTGTACGCAACCCAGTCAATTCACAAGCTGCTGGCG
GGCATCAGCCAGGCCAGCCATGTGCTGGTGCAGGACTCGCAAAACACCAAGCTCGACAGGCACCTTTTCAACGAGGCCTA
CCTGATGCACACCTCGACTTCGCCGCAGTACAGCATCATCGCCAGCTGCGATGTGGCCGCCGCCATGATGGAGCCGCCCG
GCGGCACCGCGTTGGTCGAGGAGAGCATTGCCGAGGCACTGGACTTTCGCCGGGCCATGCGCAAGATCGACGATGAATAC
GGCAGTGACTGGTGGTTCAAGGTCTGGGGGCCGGACAAGCTGGTGGAAGAGGGCATTGGCCTGGCCGAGGACTGGATCAT
CAAGGGTGAGTCGCGCAGTGCCAAGAGGGCCAAAAACGGCGCCAATAACTGGCATGGCTTTGGCCAGATGGCAACAGGCT
TCAACATGCTCGACCCGATCAAGTCGACCATTGTCACGCCCGGGCTGGACCTCAATGGAAAATTCGCGAAAACCGGCATT
CCCGCCAGCATCGTGACCAAGTTTTTGGCCGAGCACGGGGTGATCGTGGAGAAAACCGGGCTTTACAGCTTCTTCATCAT
GTTCACCATCGGCATCACCAAAGGCCGCTGGAACACCCTGCTCACAGCGCTTCAGCAGTTCAAGGATGACTACGCCAAGA
ACCAGCCGATGTGGCGCATCCTGCCCGAGTTCTGCCAGAAGTACCCGAAATACGAGCGCATGGGCCTGGCTGACCTGTGT
CAGCACATTCATGCCCTTTACGCCAAATACGACATCGCGCGGTTAACGACCGAAGTCTATTTGAGTGACCTCGCACCGGT
CATGAAGCCCAGTGACGCCTATGCCCACATTGCCCACCGCACGACAGAGCGGGTCGAGATCGACCAGCTGGAAGGCCGCA
TCACCGTCGGGCTGGTCACGCCTTACCCACCCGGCATCCCGCTGCTGATTCCTGGCGAGGTGTTCAACAAGAAAATAGTT
GATTACCTCAAGTTTGCCCGTGAGTTCAACGCGCAATGCCCGGGGTTCGAGACCGATATCCACGGCTTGGTCGAAGAGGT
GGATGCCAAAGGCAAGGTCCGCTACTACGCCGACTGCGTGAAGAAAGCCCGCTGA

Protein sequence :
MKFRFPIVIIDEDFRSENTSGLSIRALAQAIESEGFEVLGVTSYGDLSQFAQQQSRASAFILSIDDEEFTPGPDLDPAVL
NLRNFIEEVRRKNLDVPIYVYGETKTSRHIPNDILRELHGFIHMFEDTPEFVARHILREAKSYLEGVQPPFFKALLDYAE
DGSYSWHCPGHSGGVAFLKSPVGQMFHQFFGENMLRADVCNAVEELGQLLDHDGAIGASERNAARIFNADHCFFVTNGTS
TSNKMVWHHTVAPGDVVVVDRNCHKSILHAIIMTGAIPVFLKPTRNHFGIIGPIPQSEFEPEAIKAKIRANPLLKGVDAD
KVKPRVLTLTQSTYDGVLYNTETIKGMLDGYVDNLHFDEAWLPHAAFHPFYGSYHAMGKNRIRPKNAVVYATQSIHKLLA
GISQASHVLVQDSQNTKLDRHLFNEAYLMHTSTSPQYSIIASCDVAAAMMEPPGGTALVEESIAEALDFRRAMRKIDDEY
GSDWWFKVWGPDKLVEEGIGLAEDWIIKGESRSAKRAKNGANNWHGFGQMATGFNMLDPIKSTIVTPGLDLNGKFAKTGI
PASIVTKFLAEHGVIVEKTGLYSFFIMFTIGITKGRWNTLLTALQQFKDDYAKNQPMWRILPEFCQKYPKYERMGLADLC
QHIHALYAKYDIARLTTEVYLSDLAPVMKPSDAYAHIAHRTTERVEIDQLEGRITVGLVTPYPPGIPLLIPGEVFNKKIV
DYLKFAREFNAQCPGFETDIHGLVEEVDAKGKVRYYADCVKKAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 3e-106 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bpro_2415 YP_549232.1 ornithine decarboxylase VFG1670 Protein 2e-106 41