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Name : Bpro_1944 (Bpro_1944) Accession : YP_548773.1 Strain : Polaromonas sp. JS666 Genome accession: NC_007948 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : 3.1.21.3 Position : 2004590 - 2007694 bp Length : 3105 bp Strand : + Note : - DNA sequence : ATGACCGAAGACCAACTTGAACAGGAAACCTTAGCCTGGCTGGCCGATGTGGGATACACCCATCGCTATGGTCCCGACAT CGCCCATGATGGTGCTATGCCCGAGCGCAGCAGCTACCGCCAGGTGTTGCTGCCGTTTCGCCTGCGCGAGGCCATCCAGA AGCTCAATCCCGGGATCCCTACTGCCGCCCGTGAAGATGCCCTCAAGCAGGTGCTTGATCTTGGCATACCCGCATTGCTG ACGGCCAACCAGCACTTCCACCGGCTGCTGGTGGCCGGTGTGCCGGTGCGGTACCAGAAGGACGGTGAAACTCGGGGCGA CTTTGTGCGCCTGATTGACTGGGCTGATCCTGAGCGCAACGAGTGGCTGGCGGTTAACCAGTTCAGCATCAAGGGCCCTC ACCACACACGCCGGCCCGACATTGTCTTGTTCGTCAACGGCCTGCCGCTGGTGCTGCTAGAACTGAAGAACCCGGCGGAT AAAAACGCCGACATCTGGCGAGCTTACGACCAGATTCAGACGTACAAAGAGCAGATTCCCGACGTATTTCAGACTAATGA GGTGCTGGTCATCACCGACGGTACCGAGGCGTTGATGGGGTCGTTGTCGGCCGATGCCGAGCGTTTCATGGCCTGGCGCA CCATCGACGGCGTGACGCTGGATCCCTTGGGCGAGTTCAACGAACTGCAAACCCTGGTGCGCGGCGTGCTGGCGCCGGCC TATTTCCTGGACTTCCTCCGTTACTTTGTGCTGTTCGAGGACGATGGCGCCCTGGTCAAAAAGATCGCCGGTTACCACCA GTTCCACGCTGTGCGTGCTGCCATTCTCCAGGTGGTGGACGCATCGCGTCCGGGAGGCTCCCAAAAAGGCGGTGTGGTCT GGCACACCCAGGGTAGCGGCAAGAGCATCACCATGACCTGCTTTGCCGCCCGCGTCATGCAGGAACCGGCGATGGAGAAC CCCACCATCGTCGTCATCACCGACCGCAACGACCTGGACGGGCAGTTGTTTGGCGTGTTCAGCCTGGCACAAGACCTGTT GCGCGAGCAGCCGGTGCAGGTGAGTACCCGTCAGGATCTACGCGCCAAATTGGCCAACCGACCTTCTGGCGGCATCGTAT TTGCAACTATCCAGAAATTCATGCCTGGCGAGGACGAGGACACGTTCCCAATGCTGTCCGACAGGCACAACATCGTCGTG ATCGCCGATGAGGCTCACCGCACACAATATGGCTTTGAGGCTAAGCTCAAAGGCAAACAAGGGCAGGAAAGTTACCAGGG CGGCTATGCCCAGCACTTGCGCGATGCGTTGCCTAACGCGACCTTTGTTGCATTTACCGGCACTCCCGTCAGCAGCACCG ACCGCGACACCCGGGCCGTGTTCGGCGACTACATCCATATCTACGACATGCAACAGGCCAAGGACGATGGCGCCACCGTG GCCATCTACTACGAGTCGCGCCTGGCCAAACTCAGCCTGATTGAGTCCGACCTGTCGCAGATGGACGAGGAGGTCGACGA ACTGGCCGAGGACGACGAGGAAAGCCAGCAGGCCGTCCTCAAAAGCCGCTGGGCCGCTCTCGAGAAGGTTGTTGGCGCGG AACCGCGCGTGGCCAGCGTGGCAGCCGATTTGGTAACTCACTTCGAGGAACGCAACAAGGCACAGCCCGGCAAGGCGATG GTTGTGGCCATGAGCCGCGACATCTGCGTCCACCTGTACAACGAGATCGTAAAGCTGCGCCCGGACTGGCACGATGCTGA CCCGGAGAAGGGCGCCGTCAAGATCGTCATGACCGGCTCGGCAAGTGACAAACCACTGCTGCGTCCGCACATTTACAGCG CCCAGACCAAGAAGCGGCTGGAAAAGCGCTTCAAGGACCCGGCCGATCCGCTGCGCCTCGTGATCGTGCGTGACATGTGG CTGACTGGCTTTGACGCCCCTTGCGTGCATACCCTGTACGTGGACAAGCCCATGAAGGGCCATAACCTGATGCAGGCCAT AGCCCGCGTGAATCGTGTGTTCAAGGACAAGCAAGGCGGCCTGGTGGTGGACTATATCGGCATCGGCAACGAGCTGAAGT CGGCCATGAAGGAATACACCCAATCAAAGGGCCGTGGCCGTCCCACGGTGGACGCGCATGAGGCGTATAGCGTGCTCGCG GAAAAGCTTGATGTGCTGCGCTCCATGCTGCACGGCTTTGATTACACCGGATTCTTGACTGGCGGACACAAAACCCTGGC CGGTGCCGCCAACCATGTGCTGGGCCTCAACACCGGCTCGTCCCGGGACGGCAAGAAGCGATTTGCCGACACTGCGCTGG CCATGAGCCAGGCGTTTACGCTGTGCTGCACGCTTGACGAAGCCAAGGCAGTGCGCGAGGAAGTGGCCTTTATGCAGGGC GTGAAGGTCATCTTGACGAAGAAGGAGCTGACGGCCAAGAGGCGCACGGATGAGGCGCGCGAACTGGCTATCCGGCAGAT CATCAGCTCGGCGGTGGTGTCCGAGAGTGTGGTGGACATCTTTGACGCCGTGGGCCTGGACAAGCCCAACATCGGCCTGC TGGATGACGAATTCCTTGCCCAGGTCAAAAACCTGCCGGAAAAGAACCTGGCTGTGGAGCTGCTGGAGCGGCTGCTGGAG GGGGAAATCAAAAGTCGCTTCACAAGCAATGTCGTACAGGACAAGAAGTTCTCGGAGATGCTGGCCAACGTCATCACTCG CTATCAAAACCGCTCGATTGAAACAGCGCAGGTCATGGAAGAGCTGGTGGAAATGGCCAAGAAATTCCGTGAAGCGGCAT CCCGCGGAGAGTCGCTGGGGCTGACCGAGGACGAGGTGCGCTTTTACGATGCGCTGGCTAACAACGAGTCAGCGGTACGC GAGCTGACCGACGAAACCCTCAAGAAGATCGCCCACGAGCTGACCGAGAACCTGCGTCAGAACCTGAGCGTGGACTGGTC AGAACGCGAGAGCGTGCGAGCCAAATTGCGCTTGATGGTCAAGCGCATTCTGCGCAAATACAAATACCCACCGGATCTGC AGGACGCTGCTGTGGAGCTGGTGCTGAAGCAGGCGCAGGTGATGGGGGAGAGTTGGTCGGTGTGA Protein sequence : MTEDQLEQETLAWLADVGYTHRYGPDIAHDGAMPERSSYRQVLLPFRLREAIQKLNPGIPTAAREDALKQVLDLGIPALL TANQHFHRLLVAGVPVRYQKDGETRGDFVRLIDWADPERNEWLAVNQFSIKGPHHTRRPDIVLFVNGLPLVLLELKNPAD KNADIWRAYDQIQTYKEQIPDVFQTNEVLVITDGTEALMGSLSADAERFMAWRTIDGVTLDPLGEFNELQTLVRGVLAPA YFLDFLRYFVLFEDDGALVKKIAGYHQFHAVRAAILQVVDASRPGGSQKGGVVWHTQGSGKSITMTCFAARVMQEPAMEN PTIVVITDRNDLDGQLFGVFSLAQDLLREQPVQVSTRQDLRAKLANRPSGGIVFATIQKFMPGEDEDTFPMLSDRHNIVV IADEAHRTQYGFEAKLKGKQGQESYQGGYAQHLRDALPNATFVAFTGTPVSSTDRDTRAVFGDYIHIYDMQQAKDDGATV AIYYESRLAKLSLIESDLSQMDEEVDELAEDDEESQQAVLKSRWAALEKVVGAEPRVASVAADLVTHFEERNKAQPGKAM VVAMSRDICVHLYNEIVKLRPDWHDADPEKGAVKIVMTGSASDKPLLRPHIYSAQTKKRLEKRFKDPADPLRLVIVRDMW LTGFDAPCVHTLYVDKPMKGHNLMQAIARVNRVFKDKQGGLVVDYIGIGNELKSAMKEYTQSKGRGRPTVDAHEAYSVLA EKLDVLRSMLHGFDYTGFLTGGHKTLAGAANHVLGLNTGSSRDGKKRFADTALAMSQAFTLCCTLDEAKAVREEVAFMQG VKVILTKKELTAKRRTDEARELAIRQIISSAVVSESVVDIFDAVGLDKPNIGLLDDEFLAQVKNLPEKNLAVELLERLLE GEIKSRFTSNVVQDKKFSEMLANVITRYQNRSIETAQVMEELVEMAKKFREAASRGESLGLTEDEVRFYDALANNESAVR ELTDETLKKIAHELTENLRQNLSVDWSERESVRAKLRLMVKRILRKYKYPPDLQDAAVELVLKQAQVMGESWSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 56 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 48 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 47 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 47 |
