|
Name : Bpro_1938 (Bpro_1938) Accession : YP_548767.1 Strain : Polaromonas sp. JS666 Genome accession: NC_007948 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 1997460 - 1998998 bp Length : 1539 bp Strand : + Note : - DNA sequence : ATGCCCACAAACAGAATCACTATGCGCCGAATCAGAGAGACATTGCGCCTGCACCTGCAGGCAGGGCTGAGCTACAACGA GGTCGGCCGAGCGCTGAAGATTTCCAAGAGCGCGGCGGGCAAGTACGTGTCGCTGGCCCGCGTTGCCGGGGTGGACTGGG CGCTCGCTCAGACCCTCACCGACGAGCAACTGGAAGCCAGGCTGTATCGTCCGGCGCTGCCGCGCTCGAGCCACCAGTTG GCCCCCGACTTTGCGCTGGTGCACCAAGAGCTCAAGCGTGCCGGCGTCACCCTGCAGCTGCTGTGGGAGGAGTACGCCCG GGGCAACGCGCTGGCCTACAAGTACACAAGCTTTTGCGTCAAGTACCGGTTGTTCGCGCAGAGCTTGAAGCTCTCGATGC GCCAGGTCCACATTGGCGGCGAGAAGCTGTTCGTCGATTACGCCGGACAGACCGTGCCGCTGATCAACGCGACCACCGGC GAGATCACCGCCGCGCAGATCTTCGTGGCCACGCTGGGGGCTTCGAACTATACCTACGCCTGTGCCACCGCGCGTCAGAC CACCGCTGACTGGATCGGCGCTCAGGTGCGCGCACTCGAGTTCATCGGCGGCGTGGTGCGCCTGATCGTGCCCGACCAGA CCCGCGCCTTGATCAAGTACCCCGACCGCTATGACCCCGAGCCCAATCGAACCTACGAGGAGTTTGCCGCCCACTACGGC TGCGCCCTGCTGGCCGCGCGTCCAGGTCATCCCCGTGATAAACCCAAAGTCGAAGGCTCGGTGCTCCTGGTAGAGAGGTG GATTCTGGCGCGCCTGCGCAACCGCCGATTCTTCAGCCTAGGCGAGCTCAACCGCGCCATCGCCGAGCTTCTCATCGATC TGAACCAGCGCCCCTTCAAGAAGCTGCCCGGCTGCAGGAGAAGCGCCTTCGAGGCGCTGGACGCCCCAGCGCTCAAGCCT TTGCCGGCTACCCGCTACGAGGTCAGTCGCTGGAAGAGTGCCAAGGTAAACATCGACTATCACGTCGAGTTCGACGCTCA CTACTACAGCGTGCCACACGCCCTGGTGGGCACGACGGTCGAGATGCGCATCACCGACAGCCTGGTGGAGTGCTTTGCGG CCAACCAGCGCGTGGCCTGCCACGCCTTGAGCCACAAGCGTGGCGCCCACACCACGATTGCCGAGCACATGCCGGCGTCC CACCGCGCGCACCTGCAGTGGACGCCCGGCAAGCTGATCGACTGGGGCAAGCGCATCGGCGTGAGCACCGCTGCCGTGGT GACCTGGCAGCTTGAGCACCGCCCGCACCCCGAGCAGGGCTACCGCGCCTGCCTGGGGCTGCAGCGCCTGGCGCGCCAGT ACACGCCCGCTCGGCTGGAGGCGGCCTGTACCCGGGCGCTGTCGATCCGCTCACCCACCTACCGCAGCGTGGCCTCGATC CTCAAGAACGGGCTGGACCGCCAGCCCTCGTTGTTCACGCCCGCGACGCCCCCGCTGCCGGTCCACGAGAACGTGCGCGG CCCCGACTACTACCACTGA Protein sequence : MPTNRITMRRIRETLRLHLQAGLSYNEVGRALKISKSAAGKYVSLARVAGVDWALAQTLTDEQLEARLYRPALPRSSHQL APDFALVHQELKRAGVTLQLLWEEYARGNALAYKYTSFCVKYRLFAQSLKLSMRQVHIGGEKLFVDYAGQTVPLINATTG EITAAQIFVATLGASNYTYACATARQTTADWIGAQVRALEFIGGVVRLIVPDQTRALIKYPDRYDPEPNRTYEEFAAHYG CALLAARPGHPRDKPKVEGSVLLVERWILARLRNRRFFSLGELNRAIAELLIDLNQRPFKKLPGCRRSAFEALDAPALKP LPATRYEVSRWKSAKVNIDYHVEFDAHYYSVPHALVGTTVEMRITDSLVECFAANQRVACHALSHKRGAHTTIAEHMPAS HRAHLQWTPGKLIDWGKRIGVSTAAVVTWQLEHRPHPEQGYRACLGLQRLARQYTPARLEAACTRALSIRSPTYRSVASI LKNGLDRQPSLFTPATPPLPVHENVRGPDYYH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_3528 | YP_854247.1 | transposase for ISEc12 | Not tested | PAI I APEC-O1 | Protein | 4e-96 | 46 |
| unnamed | CAC39294.1 | hypothetical protein | Not tested | LPA | Protein | 7e-96 | 46 |
| ORF_6 | AAZ04417.1 | putative transposase subunit | Not tested | PAI I APEC-O1 | Protein | 3e-96 | 46 |
| VPI2_0005c | ACA01822.1 | IstA | Not tested | VPI-2 | Protein | 8e-99 | 43 |
