Gene Information

Name : fliP (Mfla_1968)
Accession : YP_546076.1
Strain : Methylobacillus flagellatus KT
Genome accession: NC_007947
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 2104788 - 2105540 bp
Length : 753 bp
Strand : -
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence :
ATGCATCCACGTTGTTTCACTGCTTTATTCCCCCTGGCCTTGCTCTGCTTGCCATTGCTGGGGCATGCGGCAGAGCCTGG
CGGCCTGGGACTGATCAATAGCCAGCCCGCACCGGGCGGGGGACAGAATTACTCGCTGAGCATCCAGACGCTGATCCTGC
TCACCTCCCTGACTTTCCTGCCCGCCGCCTTGCTCATGATGACCGGGTTTACCCGCATCATCATTGTGCTCTCATTGCTG
CGCCAGGCGCTGGGTACACAGTCCTCCCCGCCCAACCAGGTGCTGGTGGGATTGGCGCTGTTCCTGACCTTCTTTGTCAT
GGGGCCGGTGTTCGAACGCATCTACACCGAGGCCTACCAGCCGTTCGACGAAGAACGCATCACCATGCAGGAGGCCATGG
TCCGTGGCTCCATTCCGCTCAAGGAGTTCATGCTAAAGCAGACGCGCGAATCCGACCTGGCCTTGTTTTTCAAGATGTCG
CGCGCGGATGCCGTCGCTACCCCGGAAGAGGTGCCATTGCGTGTGTTGGTCCCGGCTTTCGTGACCAGTGAGTTGAAGAC
GGCTTTCCAGATCGGGTTTGCGATCTTCATTCCTTTTCTCATCATCGATATGGTGGTGGCAAGCATCCTGATGTCGATGG
GGATGATGATGGTGTCGCCGGCGATCGTAGCGTTGCCGTTCAAGCTGATGCTGTTCGTGCTGGTGGATGGCTGGCAATTG
CTGCTGGGTTCGCTCGCGCAGAGTTTCTATTGA

Protein sequence :
MHPRCFTALFPLALLCLPLLGHAAEPGGLGLINSQPAPGGGQNYSLSIQTLILLTSLTFLPAALLMMTGFTRIIIVLSLL
RQALGTQSSPPNQVLVGLALFLTFFVMGPVFERIYTEAYQPFDEERITMQEAMVRGSIPLKEFMLKQTRESDLALFFKMS
RADAVATPEEVPLRVLVPAFVTSELKTAFQIGFAIFIPFLIIDMVVASILMSMGMMMVSPAIVALPFKLMLFVLVDGWQL
LLGSLAQSFY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 9e-32 43
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 1e-31 43
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 1e-31 43
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 6e-32 43
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 6e-32 43
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 1e-31 43
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 7e-31 42
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 6e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_546076.1 flagellar biosynthesis protein FliP VFG2494 Protein 6e-72 74
fliP YP_546076.1 flagellar biosynthesis protein FliP VFG2338 Protein 5e-71 70
fliP YP_546076.1 flagellar biosynthesis protein FliP VFG1259 Protein 4e-63 62
fliP YP_546076.1 flagellar biosynthesis protein FliP VFG2016 Protein 5e-58 57
fliP YP_546076.1 flagellar biosynthesis protein FliP VFG0044 Protein 1e-33 42
fliP YP_546076.1 flagellar biosynthesis protein FliP VFG0394 Protein 1e-29 41