Gene Information

Name : ssuB (UTI89_C1005)
Accession : YP_540021.1
Strain : Escherichia coli UTI89
Genome accession: NC_007946
Putative virulence/resistance : Resistance
Product : aliphatic sulfonate ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 997761 - 998528 bp
Length : 768 bp
Strand : -
Note : part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease

DNA sequence : 
ATGAATACGGCTCGTCTGAACCAGGGCACACCATTGTTGCTCAATGCAGTAAGCAAACATTACGCGGAAAATATCGTCCT
GAACCAACTGGATTTACATATTCCGGCAGGTCAGTTTGTGGCGGTGGTGGGCCGCAGCGGCGGTGGCAAAAGTACTCTGC
TGCGCCTGCTGGCAGGTCTGGAAACGCCAACCGCAGGCGACGTGTTAGCGGGCACCACACCGCTGGCTGAGATTCAGGAT
GATACGCGAATGATGTTTCAGGACGCGCGTCTGCTGCCGTGGAAATCGGTGATTGATAACGTTGGGTTAGGCCTTAAAGG
CCAGTGGCGCGATGCGGCGCGTCAGGCTCTGGCTGCGGTAGGGCTGGAGAATCGCGCGGGGGAATGGCCTGCCGCACTTT
CTGGCGGACAGAAACAACGTGTGGCGCTGGCAAGGGCGCTGATTCATCGACCGGGTTTATTGTTGCTTGATGAACCACTC
GGTGCGCTGGACGCTTTAACGCGACTCGAGATGCAGGATTTGATTGTGTCACTCTGGCAGGAGCACGGCTTTACCGTCTT
GCTGGTGACGCATGATGTGAGCGAAGCGGTGGCGATGGCTGACCGGGTGTTGTTAATTGAAGAGGGAAAAATTGGTCTGG
ATTTGACGGTGGATATCCCCCGTCCGCGCCGGTTAGGGTCGGTACGATTAGCAGAGCTGGAAGCGGAAGTGTTGCAGCGG
GTGATGCAACGTGGGCACTCTGAACAACCGATTCGACGTCATGGTTAA

Protein sequence : 
MNTARLNQGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAGTTPLAEIQD
DTRMMFQDARLLPWKSVIDNVGLGLKGQWRDAARQALAAVGLENRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEPL
GALDALTRLEMQDLIVSLWQEHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVDIPRPRRLGSVRLAELEAEVLQR
VMQRGHSEQPIRRHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-32 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssuB YP_540021.1 aliphatic sulfonate ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-14 41