Gene Information

Name : hlyC (UTI89_C4927)
Accession : YP_543861.1
Strain : Escherichia coli UTI89
Genome accession: NC_007946
Putative virulence/resistance : Virulence
Product : hemolysin C
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2994
EC number : 2.3.1.-
Position : 4828108 - 4828752 bp
Length : 645 bp
Strand : -
Note : -

DNA sequence : 
ATGAATGCTTTTTTTATGTTAATGTGCGTTATGAAACTAAATGCAAGAAACATATTTAAAGGATTAATATCGTTCTCTCA
CAGACTCCGTTTACTTATTCAAGAATATAATTTAATTTATAGTGAGCTTATTATGAATATGAACAATCCATTAGAGGTTC
TTGGGCATGTATCCTGGCTCTGGGCCAGTTCCCCATTACACAGAAACTGGCCAGTTTCTTTGTTTGCAATAAATGTATTA
CCTGCAATACGGGCTAACCAATATGCTTTATTAACCCGGGATAATTACCCTGTTGCATATTGTAGTTGGGCTAATTTAAG
TTTAGAAAATGAAATTAAATATCTTAATGATGTTACCTCATTAGTCGCAGAAGACTGGACTTCAGGTGATCGTAAATGGT
TCATTGACTGGATTGCTCCTTTCGGGGATAACGGTGCCCTGTACAAATATATGCGAAAAAAATTCCCTGATGAACTATTC
CGAGCCATCAGGGTGGATCCCAAAACTCATGTTGGTAAAGTATCAGAATTTCACGGAGGTAAAATTGATAAACAGTTAGC
GAATAAAATTTTTAAACAATATCACCACGAGTTAATAACTGAAGTAAAAAACAAGACAGATTTCAATTTTTCATTAACAG
GTTAA

Protein sequence : 
MNAFFMLMCVMKLNARNIFKGLISFSHRLRLLIQEYNLIYSELIMNMNNPLEVLGHVSWLWASSPLHRNWPVSLFAINVL
PAIRANQYALLTRDNYPVAYCSWANLSLENEIKYLNDVTSLVAEDWTSGDRKWFIDWIAPFGDNGALYKYMRKKFPDELF
RAIRVDPKTHVGKVSEFHGGKIDKQLANKIFKQYHHELITEVKNKTDFNFSLTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyC CAD42040.1 HlyC protein Virulence PAI II 536 Protein 3e-76 99
hlyC NP_755444.1 hemolysin C Virulence PAI I CFT073 Protein 1e-96 99
hlyC CAD33758.1 hemolysin C Virulence PAI I 536 Protein 5e-76 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hlyC YP_543861.1 hemolysin C VFG1559 Protein 1e-76 99
hlyC YP_543861.1 hemolysin C VFG0905 Protein 4e-97 99
hlyC YP_543861.1 hemolysin C VFG1499 Protein 2e-76 99
hlyC YP_543861.1 hemolysin C VFG0842 Protein 5e-57 68