Gene Information

Name : papA (UTI89_C4895)
Accession : YP_543829.1
Strain : Escherichia coli UTI89
Genome accession: NC_007946
Putative virulence/resistance : Virulence
Product : major pilin subunit PapA
Function : -
COG functional category : N : Cell motility
COG ID : COG3539
EC number : -
Position : 4796467 - 4797030 bp
Length : 564 bp
Strand : -
Note : -

DNA sequence : 
ATGATTAAGTCGGTTATTGCCGGTGCGGTAGCTATGGCAGTGGTGTCTTTTGGTGTAAATGCTGCTCCAACTACTCCACA
GGGGCAGGGTAGAGTAACCTTTAACGGAACTGTTGTTGATGCTCCATGCAGCATTTCTCAGAAATCAGCTGATCAGTCTA
TTGATTTTGGACAGCTTTCAAAAAGCTTCCTTCAAGCAGGAGGCGTATCCAAACCAATGAATTTAGATATTGAATTGGTT
AATTGTGATATCACTTCATTTAAGGGGGTGGGAGGAGCCCCGGCAGCAAAAAAAGGGACTGTGAAGCTGGCTTTTAGTGG
TCCAAGGGTTTCTGGTCATAATGAGGAGTTAGATACCAGCGGGGGGACAGGTACTGCGATTGTAGTTCAGGCTGCAGGTA
AAAACGTTTCTTTCGATGGCACAGAAGGTGATGCTAATACCCTGAAAGATGGTGATAATGTGCTGCATTATACTGCGATT
GTTAAGAAGTCGTCAGCCAATAATGCCCAAGTTACTGAGGGTGCTTTTTCTGCAGTCGCAACCTTTAATTTAAGTTACCA
GTAA

Protein sequence : 
MIKSVIAGAVAMAVVSFGVNAAPTTPQGQGRVTFNGTVVDAPCSISQKSADQSIDFGQLSKSFLQAGGVSKPMNLDIELV
NCDITSFKGVGGAPAAKKGTVKLAFSGPRVSGHNEELDTSGGTGTAIVVQAAGKNVSFDGTEGDANTLKDGDNVLHYTAI
VKKSSANNAQVTEGAFSAVATFNLSYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papA AAZ04426.1 major fibrial protein Virulence PAI I APEC-O1 Protein 4e-62 82
papA YP_854256.1 major fibrial protein Virulence PAI I APEC-O1 Protein 6e-62 82
papA AAC61718.1 PapA Virulence PAI I CFT073 Protein 5e-31 65
papA NP_755467.1 PapA protein Virulence PAI I CFT073 Protein 2e-43 63
papA AAL67417.1 PapA Virulence PAI II CFT073 Protein 3e-44 62
papA_2 NP_757036.1 PapA protein Virulence PAI II CFT073 Protein 6e-44 62
papA YP_002414017.1 P-fimbriae major subunit Not tested Not named Protein 2e-39 59
prfA CAD42031.1 PrfA protein Virulence PAI II 536 Protein 3e-41 59
pixA CAE85161.1 PixA protein Not tested PAI V 536 Protein 5e-35 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
papA YP_543829.1 major pilin subunit PapA VFG0882 Protein 6e-44 63
papA YP_543829.1 major pilin subunit PapA VFG0893 Protein 2e-44 62
papA YP_543829.1 major pilin subunit PapA VFG1550 Protein 1e-41 59