|
Name : papD (UTI89_C4892) Accession : YP_543826.1 Strain : Escherichia coli UTI89 Genome accession: NC_007946 Putative virulence/resistance : Virulence Product : periplasmid chaperone PapD protein Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 4792443 - 4793162 bp Length : 720 bp Strand : - Note : - DNA sequence : ATGATTCGAAAAAAGATTCTGATGGCTGCCATCCCCCTGTTTGTTATATCCGGGGCAGACGCTGCTGTTTCGCTGGACAG AACCCGCGCGGTGTTTGACGGGAGTGAGAAGTCAATGACGCTTGATATCTCCAATGATAACAAACAACTGCCCTATCTTG CTCAGGCATGGATAGAAAATGAAAATCAGGAAAAAATTATTACAGGGCCGGTTATTGCCACCCCTCCGGTTCAGCGCCTT GAGCCGGGTGCGAAAAGCATGGTCAGGCTGAGTACCACACCGGATATCAGTAAACTTCCTCAGGACAGGGAATCACTGTT TTATTTTAATCTCCGGGAAATACCGCCGAGGAGTGAAAAGGCCAATGTACTGCAGATAGCCTTACAGACCAAAATAAAGC TTTTTTATCGCCCGGCAGCAATTAAAACCAGACCAAATGAAGTATGGCAGGACCAGTTAATTCTGAACAAAGTCAGCGGT GGGTATCGTATTGAAAACCCAACGCCCTATTATGTCACTGTTATTGGTCTGGGAGGAAGTGAAAAGCAGGCAGAGGAAGG TGAGTTTGAAACCGTGATGCTGTCTCCCCGTTCAGAGCAGACAGTAAAATCGGCAAATTATAATACCCCTTATCTGTCTT ATATTAACGACTATGGTGGTCGCCCGGTACTGTCGTTTATCTGTAATGGCAGCCGTTGCTCTGTGAAAAAAGAGAAATAA Protein sequence : MIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRL EPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSG GYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 7e-110 | 100 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 1e-109 | 100 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 1e-109 | 100 |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 7e-92 | 99 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 1e-109 | 99 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 2e-109 | 99 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 2e-109 | 99 |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 2e-93 | 79 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| papD | YP_543826.1 | periplasmid chaperone PapD protein | VFG1547 | Protein | 4e-110 | 100 |
| papD | YP_543826.1 | periplasmid chaperone PapD protein | VFG0885 | Protein | 3e-92 | 99 |
| papD | YP_543826.1 | periplasmid chaperone PapD protein | VFG0896 | Protein | 8e-110 | 99 |
