Gene Information

Name : gspI (UTI89_C3380)
Accession : YP_542358.1
Strain : Escherichia coli UTI89
Genome accession: NC_007946
Putative virulence/resistance : Virulence
Product : type II secretion protein GspI
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3309531 - 3309902 bp
Length : 372 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGCGCGGATTTACCTTGCTGGAAGTGATGCTCGCGCTGGCGATTTTTGCGCTGGCTGCCATGGCGGTGTTACAGAT
TGCCAGCGGTACGCTGAGTAATCAGCAAATCCTTGAGGAGAAAACGGTAGCGGGCTGGGTAGCTGAAAACCAGACTGCGC
TGCTTTACCTGATGACCCGTGAACAACGAGCGGTCAGGCACCAGGGCGAGAGTGATATGGCAGGAAGCCGCTGGTACTGG
CGAACGATCCCTCTGAATACCGGTAACGTGCTGCTCCAGGCGGTGGATATTGAAGTCAGTCTTCATGACGACTTTTCGCC
AGTGATTCAGTCAAGACGCGCCTGGTTTAGCGCCGTGGGAGGCCAACAGTGA

Protein sequence : 
MKRGFTLLEVMLALAIFALAAMAVLQIASGTLSNQQILEEKTVAGWVAENQTALLYLMTREQRAVRHQGESDMAGSRWYW
RTIPLNTGNVLLQAVDIEVSLHDDFSPVIQSRRAWFSAVGGQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspI YP_854402.1 type II secretion protein GspI Not tested PAI I APEC-O1 Protein 2e-42 100
gspI CAE85229.1 GspI, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-40 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspI YP_542358.1 type II secretion protein GspI VFG2052 Protein 3e-40 91