Gene Information

Name : gspJ (UTI89_C3379)
Accession : YP_542357.1
Strain : Escherichia coli UTI89
Genome accession: NC_007946
Putative virulence/resistance : Virulence
Product : type II secretion protein GspJ
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4795
EC number : -
Position : 3308929 - 3309498 bp
Length : 570 bp
Strand : -
Note : -

DNA sequence :
ATGCTGGTGGCGATAGCCATTTTTGCCTCACTGGCACTGATGGCGCAGCAGGTGACAAACGGCGTTACACGCGTGAATAG
CGCCGTCGCCGGACACGATCAAAAACTAAACCTCATGCAGCAAACGATGAGTTTTCTGACCCACGATCTGACACAAATGA
TGCCGCGTCCGGTAAGAGGCGATCAGGGCCAGCGTGAACCAGCGTTACTGGCGGGCGCTGGCGTTCTGGTGTCTGAGAGT
GGAGGAATGCGTTTTGTGCGCGGCGGTGTGGTTAACCCGTTGATGCGTCTGCCACGCAGCAATCTGCTCACCGTCGGTTA
CCGCATTCATGACGGTTATCTCGAACGGTTAGCCTGGCCACTGACCGATGCGGCAGGCAGCGTGAAGCCAACAACGCAAA
AATTAATCCCGGCGGATTCGCTCCGTTTGCAGTTCTACGACGGCACGCGCTGGCAGGAGAGCTGGTCATCAGTGCAGGCG
ATTCCTGTGGCAGTACGCATAACCCTGCATTCGCCACAATGGGGCGAAATTGAACGCATCTGGTTGTTACGCGGGCCGCA
ATTATCATGA

Protein sequence :
MLVAIAIFASLALMAQQVTNGVTRVNSAVAGHDQKLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPALLAGAGVLVSES
GGMRFVRGGVVNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTTQKLIPADSLRLQFYDGTRWQESWSSVQA
IPVAVRITLHSPQWGEIERIWLLRGPQLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspJ YP_854401.1 type II secretion protein GspJ Not tested PAI I APEC-O1 Protein 2e-85 100
gspJ CAE85228.1 GspJ, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-84 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspJ YP_542357.1 type II secretion protein GspJ VFG2053 Protein 5e-84 97