Gene Information

Name : kpsT (UTI89_C3374)
Accession : YP_542352.1
Strain : Escherichia coli UTI89
Genome accession: NC_007946
Putative virulence/resistance : Virulence
Product : polysialic acid transport ATP-binding protein kpsT
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 3303752 - 3304411 bp
Length : 660 bp
Strand : -
Note : -

DNA sequence : 
ATGATTAAGATTGAGAATTTGACGAAGTCTTATCGCACGCCCACTGGGCGGCATTATGTTTTTAAAAATTTGAATATTAT
TTTTCCTAAAGGCTATAACATTGCCCTGATTGGTCAAAATGGAGCCGGTAAATCAACTTTACTTCGGATAATTGGTGGTA
TAGATCGTCCTGATAGTGGGAACATTATTACAGAACATAAAATTTCATGGCCCGTTGGATTGGCTGGTGGATTTCAAGGA
AGTTTAACCGGTCGTGAAAATGTTAAATTTGTTGCCCGACTATATGCAAAACGCGATGAGTTAAATGAGAGGGTTGATTT
TGTTGAAGAGTTTTCCGAACTCGGAAAATATTTCGATATGCCCATTAAAACTTATTCTTCTGGCATGAGGTCAAGGTTAG
CTTTTGGATTAAGTATGGCTTTTAAATTCGACTATTATCTTATTGATGAAATCACTGCTGTTGGAGACGCAAAGTTTAAA
AAGAAATGTTCAGATATATTCGATAAAATAAGAGAAAAATCTCATTTAATAATGGTGTCACATAGTGAACGAGCTTTAAA
GGAGTATTGTGATGTTGCTATTTATCTTAACAAAGAGGGGCAAGGTAAATTTTATAAAAATGTTACGGAAGCCATTGCTG
ATTACAAAAAAGACCTATAG

Protein sequence : 
MIKIENLTKSYRTPTGRHYVFKNLNIIFPKGYNIALIGQNGAGKSTLLRIIGGIDRPDSGNIITEHKISWPVGLAGGFQG
SLTGRENVKFVARLYAKRDELNERVDFVEEFSELGKYFDMPIKTYSSGMRSRLAFGLSMAFKFDYYLIDEITAVGDAKFK
KKCSDIFDKIREKSHLIMVSHSERALKEYCDVAIYLNKEGQGKFYKNVTEAIADYKKDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 4e-100 100
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 1e-75 72
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 9e-44 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsT YP_542352.1 polysialic acid transport ATP-binding protein kpsT VFG1449 Protein 1e-100 100
kpsT YP_542352.1 polysialic acid transport ATP-binding protein kpsT VFG0696 Protein 1e-45 48
kpsT YP_542352.1 polysialic acid transport ATP-binding protein kpsT VFG0258 Protein 3e-44 48
kpsT YP_542352.1 polysialic acid transport ATP-binding protein kpsT VFG2563 Protein 3e-42 43