Gene Information

Name : ybtX (UTI89_C2179)
Accession : YP_541181.1
Strain : Escherichia coli UTI89
Genome accession: NC_007946
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2814
EC number : -
Position : 2072825 - 2074228 bp
Length : 1404 bp
Strand : -
Note : -

DNA sequence :
TTGAGCAGGGTACTCATGCGCAATTGCTCTCACATCATGGACGTTATCAGGCGCTGTGGCAGGCGCAAATGGCCGCGCGC
GTGTGGCGCGACGACGGGGGTTCCGCGTCTGGAGAGTGGGTGCATGAGTGATGTTCAGTCGAATGTGAAACCTCTGACGT
TGACGACCGGGCGGGTGATTTTTGCTATTGCCGGCGTCTATGTGACGCAGAGTCTGGTATCGGCGCTGTCTATGCAGTCC
TTACCCGCGCTGGTGCGCGCTGCTGGCGGTTCGCTGGCGCTTGCCGGTGCGACAACCCTGTTTATGCTGCCCTGGGCGCT
GAAGTTTATTTGGGCGCCGTGGATCGAGCGCTGGCGGCTTCCGCCCGGTAGCCAGGAACGCCGTTCCCGCATGTTAATCC
TGCGTGGTCAGGTCGCGCTAGCGGCGATCCTGACTATTGCCGCAGCGATTGGCTGGTTTGGGCGAGAAGGGGGATTCCCC
GATACGCAAATCGTCGCGTTATTTGTTCTGTTTATGGTGGCAGGCACGGTCGCCTCCACCATTGATATCGCCAGCGACGG
CTTTTGTGTCGATCAACTGACCCGCACGGGTTACGGCTGGGGAAACAGCGTGCAGGTCGGCGGCAGCTATCTGGGAATGA
TGTGCGGCGGCGGGGTGTTCCTGATGCTGTCGGCGGCATCCGGCTGGCCTGTCGCCATGCTGATGATGGCGGTGCTGATT
ATGGCGCTGTCACTCCCGCTGTGGCGCATTACGGAGCCGACGCGAACAGCGACTATCCCGCATGTTCCGGCGTTAGGTTA
TGCGCTAAGGAGGAAGCAGGCGCGCCTGGGCTTACTGCTGGTATTGATGCTGAATTCAGGCATGCGGTTTGTGCTGCCTC
TTCTGGCACCGCTGTTGTTGGATCATGGGTTGAGCATGTCCGCATTGGGCGCGCTGTTCAGCGGCGGCAATATTGCAGCG
GGCATAGCAGGAACGCTGGCCGGCGGATTGCTGATGAAATACACCTCACCCGGCAGAGCGCTGTTGACGGCTTATGGCGT
CCAGGGGATCGCGCTGCTGGCGGTGGTGATGACGCTCATGATGGCGCCGGGTCATCTGCTGCTGCAGATTCTCCAGTGTC
TGGTCATTGTCCAGTCCATTTCGCTGGCCTGCGCGCTGGTCTGTCTTTACGCCACGCTGATGTCGCTTTCATCGCCTTTG
CAGGCCGGTGTCGACTTCACCCTCTTTCAATGTACTGACGCGGCAATCGCCATTCTGGCTGGCGTTATCGGTGGCGTTGT
TGCTCAACATTTTGGCTATGCGGCCTGCTTCCTGTTTGCCGGGGCATTCACGTTGCTGGCGGCGTGGGTTGCTTATATCC
GGCTGCATTCGGCAAGAGAACTGATGACAAGCGCAATTGATTGA

Protein sequence :
MSRVLMRNCSHIMDVIRRCGRRKWPRACGATTGVPRLESGCMSDVQSNVKPLTLTTGRVIFAIAGVYVTQSLVSALSMQS
LPALVRAAGGSLALAGATTLFMLPWALKFIWAPWIERWRLPPGSQERRSRMLILRGQVALAAILTIAAAIGWFGREGGFP
DTQIVALFVLFMVAGTVASTIDIASDGFCVDQLTRTGYGWGNSVQVGGSYLGMMCGGGVFLMLSAASGWPVAMLMMAVLI
MALSLPLWRITEPTRTATIPHVPALGYALRRKQARLGLLLVLMLNSGMRFVLPLLAPLLLDHGLSMSALGALFSGGNIAA
GIAGTLAGGLLMKYTSPGRALLTAYGVQGIALLAVVMTLMMAPGHLLLQILQCLVIVQSISLACALVCLYATLMSLSSPL
QAGVDFTLFQCTDAAIAILAGVIGGVVAQHFGYAACFLFAGAFTLLAAWVAYIRLHSARELMTSAID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtX YP_853071.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 4e-140 100
irp8 YP_001006811.1 putative signal transducer Not tested HPI Protein 2e-118 99
irp8 YP_002346906.1 signal transducer Not tested HPI Protein 2e-120 99
ybtX YP_070128.1 MFS superfamily transporter signal transducer Virulence HPI Protein 2e-120 99
ybtX CAA21386.1 - Virulence HPI Protein 3e-139 99
ybtX NP_669702.1 hypothetical protein Virulence HPI Protein 1e-141 99
ybtX NP_993011.1 signal transducer Virulence HPI Protein 1e-141 99
irp8 CAB46571.1 signal transducer, Irp8 Virulence HPI Protein 5e-136 98