Gene Information

Name : ydcW (UTI89_C1663)
Accession : YP_540672.1
Strain : Escherichia coli UTI89
Genome accession: NC_007946
Putative virulence/resistance : Unknown
Product : gamma-aminobutyraldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.8
Position : 1586656 - 1588080 bp
Length : 1425 bp
Strand : +
Note : catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation

DNA sequence :
ATGCAACATAAGTTACTGATTAACGGAGAACTGGTTAGCGGCGAAGGGGAAAAACAGCCTGTCTATAATCCGGCAACGGG
GGACGTTTTACTGGAGATTGCCGAGGCATCCGCAGAGCAGGTCAATGCTGCTGTTCGCGCGGCAGATGCAGCATTTGCCG
AATGGGGGCAAACCACGCCAAAAGCGCGTGCGGAATGCCTGCTGAAACTGGCTGATGTTATCGAAGAAAATGGTCAGGTT
TTTGCCGAACTGGAGTCCCGTAATTGTGGCAAACCGCTGCATAGCGCGTTCAATGATGAAATTCCGGCGATTGTCGATGT
CTTTCGCTTTTTCGCCGGTGCGGCGCGCTGCCTGAATGGTCTGGCGGCAGGTGAATATCTTGAAGGTCATACTTCGATGA
TCCGTCGCGATCCGTTGGGGGTCGTGGCTTCTATCGCACCGTGGAATTATCCGCTGATGATGGCTGCGTGGAAACTGGCT
CCGGCGCTGGCGGCAGGGAACTGCGTAGTGCTTAAACCATCAGAAATTACCCCGCTGACCGCGTTGAAGTTGGCAGAGCT
GGCGAAAGATATCTTCCCGGCTGGCGTGATTAACGTGCTGTTTGGCAGAGGCAAGACGGTGGGAGATCCGCTGACCGGAC
ATCCCAAAGTGCGGATGGTGTCGCTGACGGGTTCTATCGCCACTGGGGAACACATCATCAGCCATACCGCGCCGTCCATT
AAGCGTACTCATATGGAACTTGGTGGCAAAGCGCCAGTGATTGTTTTTGATGATGCGGATATTGAAGCAGTGGTCGAAGG
TGTACGTACTTTTGGCTATTACAATGCCGGACAGGATTGTACTGCGGCTTGTCGGATCTACGCGCAAAAAGGCATTTACG
ATACGCTGGTGGAAAAACTCGGTGCTGCGGTGGCAACGTTAAAATCGGGTTCGCCGGATGACGAGTCTACGGAGCTTGGA
CCTTTAAGCTCGCTGGCGCATCTCGAACGCGTCAGCAAGGCGGTAGAAGAGGCGAAAGCGACAGGGCACATCAAAGTGAT
CACTGGCGGTGAAAAGCGCAAGGGTAATGGCTATTACTATGCGCCGACGCTGCTGGCTGGCGCATTACAGGACGATGCCA
TCGTGCAAAAAGAGGTATTTGGTCCGGTAGTGAGTGTTACGCTCTTCGACAACGAAGAACAGGTGGTGAACTGGGCGAAT
GACAGTCAGTACGGACTTGCATCTTCGGTATGGACGAAAGATGTGGGCAGGGCGCATCGCGTCAGCGCGCGGCTGCAATA
TGGTTGTACCTGGGTCAATACCCATTTCATGCTGGTAAGTGAAATGCCGCACGGTGGGCAGAAACTTTCTGGTTACGGCA
AGGATATGTCACTTTATGGGCTGGAGGATTACACTGTCGTCCGCCACGTCATGGTTAAACATTAA

Protein sequence :
MQHKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVNAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENGQV
FAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLA
PALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSI
KRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGSPDDESTELG
PLSSLAHLERVSKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTLFDNEEQVVNWAN
DSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVKH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 7e-153 68