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Name : polA (LSL_0488) Accession : YP_535380.1 Strain : Lactobacillus salivarius UCC118 Genome accession: NC_007929 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : 2.7.7.7 Position : 536545 - 539223 bp Length : 2679 bp Strand : + Note : COG0749 [L] DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA sequence : ATGGTAGAAGAAAAAAATAAATTATTATTAATAGATGGAAATAGTGTCACATTTAGAGCTTTTTTTGCTTTGCACAATTC TTTAAGTAGATTTGTAAATCATGAAGGATTACATACTAATGCAATTTATGGATTTAAGAATATGTTAGATAGCATCTTAA CTAAGGTTAACCCTACACATATATTAGTAGCATTTGATGCTGGTAAAACTACTTTTAGAACTGAAAAATTCACTGATTAT AAAGGTGGGAGAGCTAAAACTCCTTCAGAATTATCAGAGCAATTTCCAGAAATAAAAAATTTACTAGAAGGATATGGAAT AAAAACTTACGAGCTAAAAAATTATGAGGCTGATGATATTATCGGAACATTAGCTGCAAAAGCTGAAAAGAAAAATTATG ATGTTGTAGTTGTTACAGGAGATAGGGATCTAACGCAATTAACAACTGACAAAATAACAGTTGCTGTAACAGTTAAGGGT GTTAGTGAAATTGAAGAATATACTCCAAGTCATGTTGAAGAAAAAATAGGTTTAATCCCTGAACAAATCGTTGATATGAA AGCTTTAGTGGGGGATACTTCTGATAATTATCCTGGGGTTACAAAAATTGGTGAGAAGACAGCAATTAAATTGTTGAAAC AATATGGTACTTTAGATGGAATCTATAAAAATATAGATGAAATGAAAAAGTCTAAGATGAAAGAAAATTTAATCAGAGAA AAGGAAATTGCTTATTTATGCCAAGATTTAGCAGAAATTAGGAAAGACGCTCCAGTTGAAATAGATTTAGAAGAAACTGA ATGGACTGGGAAAAATATTGAGAAACTAGTAACGTTATATCAAAAATTAGATTTTCGAAAGTTTTTATCACAATTAAAGG CTGAAAGCAGTGAACAATTAGATATTTTTGAATCTAAAAGTAATATAGAATTTACTGAATTAACAGAAGAAAATTTGAAT GATATAAAGATTAGTGATAATGACGAAATAGTATTTAATTTAGAAATAGATGGAGAAAATTATCATACAGCTGAAATTAT TGGTTTCTCTATTAAAATAGGTGATAAATATTTAGTGTCGGATGATATAGATTTACTAAAGAAAAAACAAATCAAGAATT TGTTGGAATCTGATGAAGTTGAAGTAGATTTATTTGATGGCAAAAGACAATATGTTGGCTTAAATAGATTAGGTGTTACT TTATCGAAAATTAATTTTGATTTGTTACTTGTATCATACTTGCTAGATAATAGTGAAAATAGTAATGATCTAGGTTTGTT GGCACAACAGCACGAATATTATGATGTAGAATCTGATGAGCAAATATATGGTAAAGGTGCTAAACATGCTGTGCCAGAAG ATAAAGAAGTTTTATTTGAACATTTAGTGAGAAAAGTAAAAGCGATAAATAATTTAAAAGAAAAATTATTTAATGAGTTA GAAGAAAATCAGCAACTAGATCTATATACAAAAATAGAACGTCCATTGTCGATTATATTAGCAAATATGGAAATTGCGGG CGTAAAAGTGGATAGTAATAGACTAGAAACTATGCAAAGTGAATTGAAAGAACGATTAAGTGAACTAGAGCAGGAAATAT ATAATGAAGCTGGAGAAGAATTTAACTTAAATTCACCAAAACAATTAGGTGTTATATTGTTTGAAAAATTAAAGTTACCA GTTATTAAAAAGACAAAAACAGGATATTCAACAGCAGTAGGTGTATTAGAGCAACTTAGAGGTATGTCCCCAATTGTTGA TAATATTTTACAATATCGTCAATTAGCTAAAATACAATCTACATATATTGAGGGATTGTTAAAAGTAGTTTCTAAGAAAG ATGGGAAGGCCCATACAAGATATACTCAAACATTAACTTCAACGGGAAGACTATCTTCAGTTGATCCAAATTTACAAAAT ATTCCTGTTCGTTTAGAAGAAGGTCGAAAAATACGTCAAGCTTTTGTTCCAAGTCATCCGGGATGGGAAATATTTTCTTC TGATTATTCACAGATTGAATTACGTGTATTGGCACATATTTCAAAAGACAAAAATATGCAAGAGGCTTTTAAGGAAGGCA TGGATATTCACGCAAGTACAGCGATGAGAATTTTTAATGTAGATAGTCCGGATGAAGTAACTCCTAATATGAGAAGACAA GCTAAAGCTGTTAATTTTGGAATTGTATATGGTATTAGCGATTACGGTTTATCACAAAATATAGGAATATCAAGAAAACA GGCTAAACAATTTATAGATACCTATTTAGATACATTTTCAGGCGTAAAAGATTATATGGAAAAAATTGTTGAATTCGCTA AAGAAAATGGATACGTAGAAACTATTTTTAACAGAAGAAGATATCTACCTGATATAAAGAGTCGTAATTTTAATTTACGC TCTTTTGCTGAAAGAACGGCTATGAATTCACCAATTCAGGGTAGTGCAGCTGATATTATTAAGGTTGCGATGATTAATAT GCAAGAAATGTTAAAAGAAAAGAATTTACAAGCAAAAATGCTACTTCAAGTACATGACGAATTAATCTTTGAAGCACCAA CAGAAGAAATTCCATTATTAGAGGATATGGTTCCAAAAGTTATGGATTCAGCAGTTAAGCTAGATGTACCGCTAAAAGTT GAAAGTAAGCATGGACAAACTTGGTTTGATACGAAGTAG Protein sequence : MVEEKNKLLLIDGNSVTFRAFFALHNSLSRFVNHEGLHTNAIYGFKNMLDSILTKVNPTHILVAFDAGKTTFRTEKFTDY KGGRAKTPSELSEQFPEIKNLLEGYGIKTYELKNYEADDIIGTLAAKAEKKNYDVVVVTGDRDLTQLTTDKITVAVTVKG VSEIEEYTPSHVEEKIGLIPEQIVDMKALVGDTSDNYPGVTKIGEKTAIKLLKQYGTLDGIYKNIDEMKKSKMKENLIRE KEIAYLCQDLAEIRKDAPVEIDLEETEWTGKNIEKLVTLYQKLDFRKFLSQLKAESSEQLDIFESKSNIEFTELTEENLN DIKISDNDEIVFNLEIDGENYHTAEIIGFSIKIGDKYLVSDDIDLLKKKQIKNLLESDEVEVDLFDGKRQYVGLNRLGVT LSKINFDLLLVSYLLDNSENSNDLGLLAQQHEYYDVESDEQIYGKGAKHAVPEDKEVLFEHLVRKVKAINNLKEKLFNEL EENQQLDLYTKIERPLSIILANMEIAGVKVDSNRLETMQSELKERLSELEQEIYNEAGEEFNLNSPKQLGVILFEKLKLP VIKKTKTGYSTAVGVLEQLRGMSPIVDNILQYRQLAKIQSTYIEGLLKVVSKKDGKAHTRYTQTLTSTGRLSSVDPNLQN IPVRLEEGRKIRQAFVPSHPGWEIFSSDYSQIELRVLAHISKDKNMQEAFKEGMDIHASTAMRIFNVDSPDEVTPNMRRQ AKAVNFGIVYGISDYGLSQNIGISRKQAKQFIDTYLDTFSGVKDYMEKIVEFAKENGYVETIFNRRRYLPDIKSRNFNLR SFAERTAMNSPIQGSAADIIKVAMINMQEMLKEKNLQAKMLLQVHDELIFEAPTEEIPLLEDMVPKVMDSAVKLDVPLKV ESKHGQTWFDTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 54 |
