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Name : LSL_0221 (LSL_0221) Accession : YP_535119.1 Strain : Lactobacillus salivarius UCC118 Genome accession: NC_007929 Putative virulence/resistance : Unknown Product : ABC transporter permease Function : - COG functional category : V : Defense mechanisms COG ID : COG0842 EC number : - Position : 274863 - 275975 bp Length : 1113 bp Strand : + Note : COG0842 [V] ABC-type multidrug transport system, permease component DNA sequence : ATGAAGACTTTAGTGATTGCTAAAAAAGTTGTTATAGAATTGATTAGAGATAAGCGTACAGTATTGCTGATGTTTGTTGC ACCATTGTTGATCTTGTGTTTGTTAAATTTGATGTTTTCTGCAAGTACAAAAACTAAAGTAACAATAGGAACAGTAGATG TTAACAATCAAATTAATCGAAAAATGGATCAAGTAGATGGGACTACCGTAAAAAAATATGAAAGTGAAAAACATGCTAAA AAAGATTTAGATGCTAATAGCTTAGACGGAGTAATCAGTTATAAAAGTAAGCAGTATGATGTAACTTATGCCAATCTAGA TGTTTCTAAAACTGTGATGACAAAGAAAGTATTAGAAAGTGCCCTTATGAAGGATAATGTTTCCAAATTACAATCAATGG TGGTTAAACAAGGACAAGTAATAGCGAAATTAACTGGGCAACAAGAGTCTGTTAAAATGAATAAATCAAAAATAAGTATA AAAAATCATTATAATTATGGAAATAGTAAAACTAATTTTTTTGATAAGATGGCCCCAATACTAATAGGATTTTTTGTGTT TTTCTTTGTATTTTTAATTTCAGGAATGGCGCTATTAAAAGAACGAATAAGTGGTACTCTAGAAAGATTATTAGCTACAC CTGTAAAGAGAAGCGAAATAGTTTATGGATATATGCTAGGTTATGGCTTAATGGCATTGGCGCAAGCAAGTCTGATAACA GTCGTAGGAATTAAATTATTAGACATTGAGATAATAGGCTCAATATTTAGTGTAATAATTATTGCAGTTTTATTGGGATT TGTCGCGCTAGCCTTTGGTATTTTGCTATCAACATTTGCTTCATCAGAATTTCAAATGATGCAATTCATTCCATTAGTAG TTGTTCCTCAGATTTTCTTTTCAGGTATCATTCCATTGGATTCAATGGCTGATTGGGCACAAAGAATTGGGAAAATTTTA CCATTAACTTATGCTGGTGAAGCCTTATCTGCAATCATAATGCAAGGAGCTGGCCTAATAGATGTAGGAAAAGATATACT AGTATTGATAATCTTTTTAGTAGTCCTATTAATTTTGAATATTTTAGGCCTAAAAAGATACAGAAAAGTTTAA Protein sequence : MKTLVIAKKVVIELIRDKRTVLLMFVAPLLILCLLNLMFSASTKTKVTIGTVDVNNQINRKMDQVDGTTVKKYESEKHAK KDLDANSLDGVISYKSKQYDVTYANLDVSKTVMTKKVLESALMKDNVSKLQSMVVKQGQVIAKLTGQQESVKMNKSKISI KNHYNYGNSKTNFFDKMAPILIGFFVFFFVFLISGMALLKERISGTLERLLATPVKRSEIVYGYMLGYGLMALAQASLIT VVGIKLLDIEIIGSIFSVIIIAVLLGFVALAFGILLSTFASSEFQMMQFIPLVVVPQIFFSGIIPLDSMADWAQRIGKIL PLTYAGEALSAIIMQGAGLIDVGKDILVLIIFLVVLLILNILGLKRYRKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0095 | NP_763650.1 | hypothetical protein | Not tested | SCCpbp4 | Protein | 7e-63 | 50 |
| SH0082 | YP_251997.1 | hypothetical protein | Not tested | SCCmec | Protein | 7e-62 | 50 |
| SH2614 | YP_254529.1 | hypothetical protein | Not tested | ¥ðSh2 | Protein | 7e-63 | 45 |
