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Name : LSL_0220 (LSL_0220) Accession : YP_535118.1 Strain : Lactobacillus salivarius UCC118 Genome accession: NC_007929 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1131 EC number : - Position : 274135 - 274860 bp Length : 726 bp Strand : + Note : COG1131 [V] ABC-type multidrug transport system, ATPase component DNA sequence : ATGAAAATAAATAACCAGAGAATACAATTACAAAATATAAAGAAGAAATTTGGAAATGATAATGTCTTAAATTCTGTTAA TTTAACAGTAAATTCGGGAGAAATAGTAGGTTTGATTGGTCCATCTGGCTCAGGAAAATCAACAACTATCAAAATTCTAT TGGGTATGGAAAAAGCTGACGAAGGTGAGGCTTTAATTTTAGAAAAGAGAATGCCCAATCGAAAATTATTAGCAGATATT GGTTATATGGCTCAATCAGATGCGCTTTATGAATCAATGACAGCTAGGGAAAATTTAAGGTTTTTCGGTTATATGAAAGA CGTTGCAAAGAAAGAATTGCCAAAAGAAATAGAATATGTTGCTGAAGTTGTTGATTTAACTAATTATTTGGATAAGAAGG TTTCAGGATATTCTGGTGGGATGAAACGAAGATTATCACTAGCAATAGCTTTACTAGCAAAACCTAAAATAATTATTTTA GATGAACCAACAGTTGGAATTGACCCTGCTCTGAGACTTAAAATATGGAAAGAATTAGCTAAATTAAGAGATGAGGGAAG AAGTATTCTTGTAACAACACATGTTATGTCTGAAGCTGAGCTGACAGATAGGGTAGCACTTCTTTTTGAGGGAAAAATCA TAGCCTTTGATAAACCTAAGAAATTAGAAGATGAATATAAAGTTAATAATATTGAAGAAGTATTTTTGAAAGTCGAGGGT GAGTAG Protein sequence : MKINNQRIQLQNIKKKFGNDNVLNSVNLTVNSGEIVGLIGPSGSGKSTTIKILLGMEKADEGEALILEKRMPNRKLLADI GYMAQSDALYESMTARENLRFFGYMKDVAKKELPKEIEYVAEVVDLTNYLDKKVSGYSGGMKRRLSLAIALLAKPKIIIL DEPTVGIDPALRLKIWKELAKLRDEGRSILVTTHVMSEAELTDRVALLFEGKIIAFDKPKKLEDEYKVNNIEEVFLKVEG E |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0081 | YP_251996.1 | hypothetical protein | Not tested | SCCmec | Protein | 2e-39 | 59 |
| SE0094 | NP_763649.1 | ABC transporter ecsA-like protein | Not tested | SCCpbp4 | Protein | 6e-49 | 57 |
| SH2613 | YP_254528.1 | hypothetical protein | Not tested | ¥ðSh2 | Protein | 3e-50 | 57 |
