Gene Information

Name : rfaG (LSL_0171)
Accession : YP_535069.1
Strain : Lactobacillus salivarius UCC118
Genome accession: NC_007929
Putative virulence/resistance : Virulence
Product : glycosyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : 2.4.1.-
Position : 198103 - 199038 bp
Length : 936 bp
Strand : +
Note : COG0463 [M] Glycosyltransferases involved in cell wall biogenesis

DNA sequence :
ATGACAAAAAAACTTTCAATTATAGTGCCTTGTTATTACGAAGAAGAAACTATACCTTTGTTCTATGAGGCTGTTGAAAA
AGTTAAAAAGGAATTAAATGGAATTGAATTAGAATATTGGTTTGTGAATGATGGTTCACAAGATGGAACTTTAGATGAAA
TGCGTAAATTAAACGCCAAAGATAAAGAACATGTACACTATGTATCATTTTCTAGAAACTTTGGTAAAGAAGCTGCACTA
TACTGTGGTTTACAACAAGCTACAGGAGATTATATAACTGTAATGGATGCTGATTTGCAAGATCCGCCAGATATGTTGCC
AGAAATGATAGAAATTCTTGAAAATGAAGACTATGATTGTGTGGGAACTAGAAGAACGAATAGAAAAGGTGAACCACCAA
TTCGTTCATTTTTTGCAAGAATGTTTTATAAGTTAATTAATAAAATTTCTGATACTGAAATTGTTGATGGTGCCAGAGAT
TTTAGAGTAATGACAAGACAAATGGTCGATGCAATCCTTTCAATGACAGAATATAATCGTTTTTCTAAAGGTATTTTTAG
TTGGGTAGGTTTTAATACTAAATATTTAGAATATAAAAACCAAGAACGAGTAGCTGGGACAACAAGTTGGAATTTTTGGA
GTTTGTTGAAATACTCAATTGATGGAATTGTCAATTTCTCTCAAGCACCTTTAGATATAGCTGTTTATTTTGGAATGTTG
ACATCATTCTTTTCAGGGATTGGAATTGTATGGATTATTATTCGTTACTTTTTAGAAGGTGGAGATCCAACGACTGGTTG
GACATCAACTATTTGTTTATTGCTATTCTTTAGCGGAATTCAACTAATGTGTCTAGGAATTGTTGGTAAATACATTGGAA
AGATCTTTTCTGAAGTTAAGAGAAGACCAGTGTATATTATAAAAGAAAAGAAGTAA

Protein sequence :
MTKKLSIIVPCYYEEETIPLFYEAVEKVKKELNGIELEYWFVNDGSQDGTLDEMRKLNAKDKEHVHYVSFSRNFGKEAAL
YCGLQQATGDYITVMDADLQDPPDMLPEMIEILENEDYDCVGTRRTNRKGEPPIRSFFARMFYKLINKISDTEIVDGARD
FRVMTRQMVDAILSMTEYNRFSKGIFSWVGFNTKYLEYKNQERVAGTTSWNFWSLLKYSIDGIVNFSQAPLDIAVYFGML
TSFFSGIGIVWIIIRYFLEGGDPTTGWTSTICLLLFFSGIQLMCLGIVGKYIGKIFSEVKRRPVYIIKEKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 8e-51 43
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 7e-47 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rfaG YP_535069.1 glycosyltransferase VFG0670 Protein 7e-48 42