|
Name : lpd (LSL_0156) Accession : YP_535054.1 Strain : Lactobacillus salivarius UCC118 Genome accession: NC_007929 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 180605 - 182011 bp Length : 1407 bp Strand : + Note : E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide DNA sequence : ATGGTAGTTGGAGATTTTGCAATAGATTTAGATACAGTTGTTGTAGGTGCTGGACCTGGTGGATATGTAGCTGCAATTCA TGCTGCAGAACTAGGTCAAAAAGTTACTGTAATTGAACGTGAATATATTGGTGGTGTATGTTTGAATGTTGGATGTATTC CTTCTAAAGCTTTGATTGAAGCTGCACATCATTACCAACATGCAATGGATTCTCAAGAAATGGGACTTCAAGTTACAGCT GCTAAGCTAGACTTCGATAAAACAATTGAATGGAAGAATAACGTTGTAGCTCGTCTAACAGGTGGGGTTGCTTCCTTATT CAAGAAACATAAGATTGATGTTATCTGGGGAAATGCATATTTGAAAGATAGTCATAGTTTACGAGTAATTTCTGATGATG ATAAGGCTCAAACATATACATTCAATAACTTGATTATTGCAACAGGTAGTCATCCAATCGAAATTCCTAACTTCAAATTT GAAGGACGTGTACTTGATTCTACAGGTGCTTTGAACTTAACAGAAGTTCCTAAGGAATTAGTTGTTGTAGGTGGTGGCTA CATTGGTTCTGAATTAGCATCTGCTTACGCTAACTTAGGTTCTCATGTAACAATCCTTGAAGGTGGAGATATGATTTTAG CTAACTATGAAAAAGACTTAGTTAAAGTTGTAGAACATCACTTCAGTGAACAAGGTGTAGATATTTACACTAATGCTATA GCTAAGAATGCAGAACAAACAGATAAAGATGTAACTGTTACTTTCGAAGTAGATGGCGAAGAAAAGAAAATTACAGCTGA TTATGTCATTGTTTCTGTTGGTCGTCGTCCAAACACTTCAAATATGGGCTTAGAACAAGCTGGTGTAAGTGTTGATGAAC GTGGTTTAATTCCTGTTGATGCACAAAGTCGTTCAAATATTCCTAACATTTACGCTATTGGTGACGTAACGAAGGGATAC GCATTAGCTCATAAAGCTTCTTACGAAGGAAAGGTTGCAGCAGAAGCTATTTCTGGCAAACCAACAGTTATTGATTACCA TGCAATGCCAGCTGTATGTTATACAGATACATCCATTGCAACAACAGGTTTGACATTAGCCGAAGCAAAGGAAAAAGGCT TTGACGCTAAGAAAGCACAATTCCCATTTGCAGCTAATGGTCGTGCAATTTCAATGGGTGAAACAGATGGATTTATCCGT TTAGTATTTGAAAAAGAAACAGGTGTCTTATTAGGTGCTCAAATGGTTGGTAGCAACGCTAGTGATTTAATTAGTGAATT AACTTTGGCTATTGAATGTGGTTCAACAGTTGAAGATGTTGCATTAACAATTCATCCACATCCTTCCTTAAGTGAAGCTG TTATGGATACTGCTGATGTTGCTATTGGATTCCCAACAAATATTTAA Protein sequence : MVVGDFAIDLDTVVVGAGPGGYVAAIHAAELGQKVTVIEREYIGGVCLNVGCIPSKALIEAAHHYQHAMDSQEMGLQVTA AKLDFDKTIEWKNNVVARLTGGVASLFKKHKIDVIWGNAYLKDSHSLRVISDDDKAQTYTFNNLIIATGSHPIEIPNFKF EGRVLDSTGALNLTEVPKELVVVGGGYIGSELASAYANLGSHVTILEGGDMILANYEKDLVKVVEHHFSEQGVDIYTNAI AKNAEQTDKDVTVTFEVDGEEKKITADYVIVSVGRRPNTSNMGLEQAGVSVDERGLIPVDAQSRSNIPNIYAIGDVTKGY ALAHKASYEGKVAAEAISGKPTVIDYHAMPAVCYTDTSIATTGLTLAEAKEKGFDAKKAQFPFAANGRAISMGETDGFIR LVFEKETGVLLGAQMVGSNASDLISELTLAIECGSTVEDVALTIHPHPSLSEAVMDTADVAIGFPTNI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 2e-104 | 47 |
