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Name : LSL_0995 (LSL_0995) Accession : YP_535886.1 Strain : Lactobacillus salivarius UCC118 Genome accession: NC_007929 Putative virulence/resistance : Virulence Product : UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : 1.1.1.- Position : 1012569 - 1014458 bp Length : 1890 bp Strand : - Note : COG1086 [MG] Predicted nucleoside-diphosphate sugar epimerases DNA sequence : ATGAATTCTATCAACAAGATAAAATCACTTCCTCAATGGGTGTTTCGAGCATTCTACCTATCTTTGTATGACTTGATAAC AGTCAATTTTGCTTATTTTATAGTGTTATGGTTACACTATAATTTGAGATACACAACCATCCCCTTAAAGTATTTACAAG CATATCTAAGTTTTGTACCAGTATACTCTTTATTTACTTTGAGTGTTTTCTATTTTTTGAAATTATATAAGAGTATTTGG AAATACGTTAGTCTGAGTGAAATGAACCGAATATTATTAGCGACAATTGTAACAGCGATTTTTCATGGAATCGGTATTAC CGTTTTATGCACAAGAATGCCTATTTCCTATTATTTAATGGGACCGCTATTTCAATTTATGTTTACCGTGAGTGTAAGGT TTGCATATCGTTTTATTAATTTAGTGAGAAGACGAAAACAAAGAAATGAAAATGCTAAATATAATTCTTTAATTATTGGA GCTGGTTCAGCAGGTCAAATTATTATTAAAGAACTAGAAAATTCATCAGTAGCACAATCTGTTCCTAAATGTGTAATTGA TGATGATCCAAACAAATGGGGTAGAATGTTGAAAAATATTCCAATTATAGGTGGACGTGAGAAAATCATTGAAGCAGTTC AAAAATTTGATATCACACAAATTATTTTTACAATACCTTCTGCAAGTGCTAAAGATAAAAGAGAGATTTTGAATATCTGT AAGGAAACGGATTGTAAGTTATTGACATTGCCAGGAGTGTATCAATTATTAAACGAAGAAGTTTTCTTACAGCATTTAAA GCCAGTAGCGGTTGAAGATTTATTAGGAAGAGAACCAATAAAGGCAGATTTAGGCCAAATCAAGAAACAAATTCAAGGTA AAGTTGTATTAATAACTGGTGGTGGAGGCTCAATTGGTTCAGAGCTTTGTCGTCAGATTGCGACCTATGATCCTAAGCAA TTAATCGTTTTTGATATCTATGAGAATAATGCTTATAGTATTGAACAAGAATTAAAAAGAAACTATCCTAATTTAAATTT AAAAGTTTTAATTGGATCAGTTCGAGATCAAAAAAGAGTAGATGATATTTTTTCGAGTTATCGACCAGATATTGTTTATC ACGCTGCTGCCCATAAGCATGTTCCATTAATGGAAGGTAGTCCTAATGAAGCAGTTAAAAACAATGTTGTTGGTACTTAT AACACTTCTAAGGCAGCCTTAAAGTACAATGCTGAACGATTTGTACTAATTAGTACAGATAAGGCAGTTAATCCAACAAA TGCAATGGGAGCTAGCAAGCGTATTTGTGAGATGATTATTCAAATGATGGATAAAGACAGTCGCAATAGAAAGAAACGAA CACAGTTTGTAGCAGTTAGATTTGGAAATGTTCTAGGCAGTAATGGTTCTGTGATTCCTTTATTCAAGAAACAAATTGCA GCCGGTGGTCCAGTTACAGTAACTCATCCTGATATTATTCGATATTTCATGACGATTTCAGAAGCAGTTGGGTTGGTTTT GCAAGCCGGAGCATATGCGGCTGGTGGAGAAATATTTGTTTTAGATATGGGACAACCAATTAAAATTGATACTTTAGCAC GAAACTTAATTAAGTTATCAGGATTGCATCCAGATGAAGATATCGAAATTAAATATATTGGTTTGCGTCCAGGAGAAAAA CTATATGAAGAAAAGTTAATGGCTGAAGAAGGATTACAAAAGACAGAAAATCAACTTATCTATATTGGAAAACCAATTCC ATTTGATGAGAAAAAATTCTTAAAAAATTTACAGAATCTAATTCAAAGTAGTCAAGAAAATCCTAAGAATATTGAAGCTC AGATGCAAAAAATTGTACCGAACTTCAAGTTTCAGGAGGTGGTAGGATGA Protein sequence : MNSINKIKSLPQWVFRAFYLSLYDLITVNFAYFIVLWLHYNLRYTTIPLKYLQAYLSFVPVYSLFTLSVFYFLKLYKSIW KYVSLSEMNRILLATIVTAIFHGIGITVLCTRMPISYYLMGPLFQFMFTVSVRFAYRFINLVRRRKQRNENAKYNSLIIG AGSAGQIIIKELENSSVAQSVPKCVIDDDPNKWGRMLKNIPIIGGREKIIEAVQKFDITQIIFTIPSASAKDKREILNIC KETDCKLLTLPGVYQLLNEEVFLQHLKPVAVEDLLGREPIKADLGQIKKQIQGKVVLITGGGGSIGSELCRQIATYDPKQ LIVFDIYENNAYSIEQELKRNYPNLNLKVLIGSVRDQKRVDDIFSSYRPDIVYHAAAHKHVPLMEGSPNEAVKNNVVGTY NTSKAALKYNAERFVLISTDKAVNPTNAMGASKRICEMIIQMMDKDSRNRKKRTQFVAVRFGNVLGSNGSVIPLFKKQIA AGGPVTVTHPDIIRYFMTISEAVGLVLQAGAYAAGGEIFVLDMGQPIKIDTLARNLIKLSGLHPDEDIEIKYIGLRPGEK LYEEKLMAEEGLQKTENQLIYIGKPIPFDEKKFLKNLQNLIQSSQENPKNIEAQMQKIVPNFKFQEVVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 9e-87 | 45 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 6e-87 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LSL_0995 | YP_535886.1 | UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase | VFG1300 | Protein | 3e-88 | 42 |
