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Name : LSL_0980 (LSL_0980) Accession : YP_535871.1 Strain : Lactobacillus salivarius UCC118 Genome accession: NC_007929 Putative virulence/resistance : Virulence Product : UDP-glucuronate 4-epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : 5.1.3.6 Position : 996533 - 997612 bp Length : 1080 bp Strand : - Note : COG0451 [MG] Nucleoside-diphosphate-sugar epimerases DNA sequence : ATGAAAAAAATAGATTTAACTGGAAAAAGAATTTTGATAACTGGCGGGGCTGGTTTTATTGGTGCTAATTTGATCTTGTC TCTGCTACAGACAGTTAAGAGTGTAAATATTTTAACAGTCGACAACATAAATGATTACTATGATGTTTCCTTAAAAGAAT GGCGCCTTCAACAAATAGAGTCAGAAGCTACTCAACATGAAGAAAGTAAATTTGAGTTCATTAAGGGAGACATTTCTGAT GTTGGATTAGTAAATCAAATCTTTGCTGATTTTAAGCCTGATATTGTGGTTAATTTAGCAGCTCAAGCTGGAGTTAGAAA TTCAATTACTAATCCAGATGCCTACATTAAGAGTAATATTATTGGATTTTACAATATTTTAGAAGCATGTCGCCACTCTT ATGATAATGAAAATGGCGTAGAGCATTTAGTATTCGCCTCATCTTCGTCAATTTATGGTAATGGTAAAGAAATACCATAC AAGACTGATAGTAATACTGATAAACCAATTTCTTTGTATGCCGCTACTAAAAAGTCTGATGAAATGTTAGCTCATGTATA CAGTCATCTTTTTGGAATTCCGATAACAGGATTAAGATTCTTTACAGTTTATGGACCAGGTGGAAGACCAGATATGGCAT ATTTTAAATTTACCAAGAAATTGATAAACGACGAAAAAATTCAGATTTTTAACTATGGGAATTGTCGTCGTGATTTCACT TATATTGACGATGTAGTTGAAGGTGTTAAGCGTGTAATGTCTGGAGTTCCAGAAAAGTCAGAACAAGATTTAGAACCAGC TTATCGAATTTACAATATTGGGAATCATCACCCTGAAAATTTGATGGAGTTTGTAAAAATTTTACAAGACGAATTAGTAA GGGCAAATGTTTTACCAAAAGATTATGATTTTGAAGGTCATATGGAATTAGTTCCGATGCAACCAGGAGATGTGGCTGTT ACATACGCTGATATTAGTGAATTAGAGAAAGATTTTAACTTTAAACCAGATACTAGATTAAGAGTAGGTTTGAGAAAATT TGCTGAATGGTATCGAGATTTTTATGAGTTAGGGAAGTGA Protein sequence : MKKIDLTGKRILITGGAGFIGANLILSLLQTVKSVNILTVDNINDYYDVSLKEWRLQQIESEATQHEESKFEFIKGDISD VGLVNQIFADFKPDIVVNLAAQAGVRNSITNPDAYIKSNIIGFYNILEACRHSYDNENGVEHLVFASSSSIYGNGKEIPY KTDSNTDKPISLYAATKKSDEMLAHVYSHLFGIPITGLRFFTVYGPGGRPDMAYFKFTKKLINDEKIQIFNYGNCRRDFT YIDDVVEGVKRVMSGVPEKSEQDLEPAYRIYNIGNHHPENLMEFVKILQDELVRANVLPKDYDFEGHMELVPMQPGDVAV TYADISELEKDFNFKPDTRLRVGLRKFAEWYRDFYELGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-73 | 48 |
