|
Name : LSL_0934 (LSL_0934) Accession : YP_535827.1 Strain : Lactobacillus salivarius UCC118 Genome accession: NC_007929 Putative virulence/resistance : Unknown Product : integrase/recombinase XerD/RipX family Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 964160 - 965053 bp Length : 894 bp Strand : - Note : COG4974 [L] Site-specific recombinase XerD DNA sequence : ATGGCGATTAACAATATTTTAATGGACTATTTGCATTATTTGAAAGTTGAGCGTGGCTTATCAGAAAATACGATTAACAG CTATGGGATTGATTTCAAATTATTTTTAGAGTATTTAAGAGAAAATGAAATTCCATCTTTTAAGCAAGTAAATAAAGAAG TTATCGTCAACTATATGCAATCTGAGAAGAATAACAATAAAGCTAATTCCAGTATTTTACGTAGTGTTAGCAGTTTAAGA AAGTTCTTCCAGTACTTAGCGCAAGAAAAAATTATTGAAAAGGACCCAATGTTGTTAATTGATACACCAAAGAAGAAACA ACATTTACCCCAAGTGCTAACTAAAGAAGAAGTTGAAAAATTATTGCGTTCACCTAATACTGGTCAGGTTTTAGGTTTAA GAGATCGGGCGATGCTGGAATTGATGTATGCCACTGGTCTGCGAATCAGTGAAATTATCAACTTGAAACTTGAAGATTTA CATTTAACAATGGGGACACTTCAAACGTTAGGTAAGGGGCATAAAGAACGAATTGTCCCAGTAGGCGATGAAGCAATTAA ATGGGTTAATCGTTATTTAGAAGAAGCTCGGCCTAAATTGTTGAAACAAAAGCGTAGTAATTATTTATTTTTGAACTTTC ATGGAAATAACTTAACGCGTCAGGGTGTATGGAAAAATTTGAAGGCAGAAGTAAGAAAAGCTGGAATTCAAAAAAATATA ACTCCACATACTTTACGTCATTCATTTGCGACTCACATTTTAGAAAATGGAGCAGATTTAAGAATTGTTCAAGAGCTATT AGGACATGCGGATATTTCAACAACACAGATCTATACGCATCTTTCAAATAAGCAATTGGCGGATATTTATAATCGTGCTC ATCCTAGAGCATAA Protein sequence : MAINNILMDYLHYLKVERGLSENTINSYGIDFKLFLEYLRENEIPSFKQVNKEVIVNYMQSEKNNNKANSSILRSVSSLR KFFQYLAQEKIIEKDPMLLIDTPKKKQHLPQVLTKEEVEKLLRSPNTGQVLGLRDRAMLELMYATGLRISEIINLKLEDL HLTMGTLQTLGKGHKERIVPVGDEAIKWVNRYLEEARPKLLKQKRSNYLFLNFHGNNLTRQGVWKNLKAEVRKAGIQKNI TPHTLRHSFATHILENGADLRIVQELLGHADISTTQIYTHLSNKQLADIYNRAHPRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 2e-55 | 43 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 2e-55 | 43 |
