Gene Information

Name : RPC_0086 (RPC_0086)
Accession : YP_529984.1
Strain : Rhodopseudomonas palustris BisB18
Genome accession: NC_007925
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 97830 - 98612 bp
Length : 783 bp
Strand : +
Note : -

DNA sequence : 
ATGAACGAGACCGCGTTCTTGCAAGCCCGCGGGCTCGGCGTCGACCTCGGCGGCCGCGCCGTGCTGCGCGACGTCTCGCT
GGCGTTGGCGCCAAAACACCTGGTGGCGCTGGTCGGGCCGAACGGCGCCGGCAAGACCACGCTGCTCCGCGCGCTGGCAG
GCTTGCTGCCGTCGACCGGCGAGATTGCGGTCGGCGGTGAACGGTTGTCGGCGCTGTCGCTGCGCGAGCGGGCTTTGCGT
TTTGCCTATCTGCCGCAGGGCCATGTGGTGCACTGGCCGCTGCCGGCGCGCGACATCGTGGCGCTCGGGCGCTATCCGCA
CGGCGCCACCGATCCGTCGCGGCTGGCGCCGACCGACGACGCCGCGGTGCGCCGCGCGATGCTGGCGACCGACACGATTG
CGCTGGCCGAGCGCCGCGTCACCGAATTGTCCGGCGGCGAACGCAGCCGGGTGGCGCTGGCGCGGGTGCTGGCGGTAGAA
GCCCCGGTGCTGCTCGCCGACGAGCCGACCGCCTCGCTCGATCCGCGCTATCAGCTCGACGTCATGCAGTATCTGCGCGA
CGCCGCCGACAGCGGCACGCTGGTGATCGTGGTGACCCACGACCTCGGGCTCGCCGCGCGTTTCGCCGACAGCGTGCTGG
TGCTGGCCGATGGCCGGTTGGCGGCGCAGGGCGCCCCGGCGGAGGCGCTCACCGATCAGGTGATGACCGAGGTGTTCCGG
GTCAGCGCCTATCGCGCGCAGCACCAAAGCGAAGCGGTGATCGTGCCGTGGGACGCCGCGTGA

Protein sequence : 
MNETAFLQARGLGVDLGGRAVLRDVSLALAPKHLVALVGPNGAGKTTLLRALAGLLPSTGEIAVGGERLSALSLRERALR
FAYLPQGHVVHWPLPARDIVALGRYPHGATDPSRLAPTDDAAVRRAMLATDTIALAERRVTELSGGERSRVALARVLAVE
APVLLADEPTASLDPRYQLDVMQYLRDAADSGTLVIVVTHDLGLAARFADSVLVLADGRLAAQGAPAEALTDQVMTEVFR
VSAYRAQHQSEAVIVPWDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-24 41
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 1e-20 41
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 1e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPC_0086 YP_529984.1 ABC transporter-like protein BAC0164 Protein 9e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPC_0086 YP_529984.1 ABC transporter-like protein VFG1042 Protein 8e-25 41