Gene Information

Name : RPC_0530 (RPC_0530)
Accession : YP_530424.1
Strain : Rhodopseudomonas palustris BisB18
Genome accession: NC_007925
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 573786 - 574748 bp
Length : 963 bp
Strand : -
Note : -

DNA sequence : 
ATGCCGCCCGGAAAAAACTCCGACGCCCGGCTGATCGAGCTGTTCCTCGACATGATCGCCGCCGAACAGGGCGCCGGCAA
GAACACGCTCGACGCCTATCGTGGCGACCTCACCGACCTGTCGGACTTCCTCGGCCACGCCAGGTCGAGCTTCGTTGCCG
CCGACACCGAGGTGCTGCGCGGCTATCTCGCCGAGCTCGACGAGCGCGGCTACAAATCGACCAGCGTGGCGCGCAAGCTG
TCGGCGTTCCGGCATCTGTTTCGCTTTCTTTTGACCGAGCGGATCCGCGCCGACGATCCGGCCGCGATCCTGTCCGGGCC
GAAGCGCGGCCGCGGCCTGCCGAAAGTGCTGTCGATCGCCGACGTCGACCGGCTGTTGCAGCACGCCAAGGATCTGATCG
CGGCGCCGCACGCCAACACCCAGCAGCGGCTGCGCGCGGCGCGGCTGTATTGCCTGCTCGAGGTACTGTACGCGACCGGA
CTGCGGGTCTCCGAGCTGGTGTCGCTGCCGTTGTCGGCGGCGCGGCGCGACGCCCGCATGATCGTGGTGCGCGGCAAAGG
CAACAAGGAGCGGCTGGTGCCGCTCAACGAATCCTCCAAGCAGGCGATGGCCGGCTATCTCGCCGCACTCGATGAGCTGC
GACAAGAAAAGGCCAAGAACGCTAGCGCCTCGAAATGGTTGTTTCCGTCGTTCGGCGAGAGCGGCCATTTGACAAGGCAG
CATTTCGCCCGCGAGCTGAAAGACCTCGCCGGCGCCGCCGGGCTGTCGCCGCGCTTGGTCAGCCCGCACGTGCTGCGCCA
CGCCTTCGCCAGCCACCTACTGCACAACGGCGCCGACCTGCGCATCGTGCAGACCCTGCTCGGTCACACCGATATTTCCA
CCACGCAGATCTACACCCATGTGGTCGAGGAACGGCTGAAGAGCCTGGTGCGCGATCTGCACCCGCTGGCTGATAAGCCG
TAG

Protein sequence : 
MPPGKNSDARLIELFLDMIAAEQGAGKNTLDAYRGDLTDLSDFLGHARSSFVAADTEVLRGYLAELDERGYKSTSVARKL
SAFRHLFRFLLTERIRADDPAAILSGPKRGRGLPKVLSIADVDRLLQHAKDLIAAPHANTQQRLRAARLYCLLEVLYATG
LRVSELVSLPLSAARRDARMIVVRGKGNKERLVPLNESSKQAMAGYLAALDELRQEKAKNASASKWLFPSFGESGHLTRQ
HFARELKDLAGAAGLSPRLVSPHVLRHAFASHLLHNGADLRIVQTLLGHTDISTTQIYTHVVEERLKSLVRDLHPLADKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-37 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-37 41