Gene Information

Name : RPC_4932 (RPC_4932)
Accession : YP_534773.1
Strain : Rhodopseudomonas palustris BisB18
Genome accession: NC_007925
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5504445 - 5505110 bp
Length : 666 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCGTGCTCGTGGTCGAGGACGACCGCCGGATCGCCGCCGATCTCGAACGCGGGCTGCAGGCGGCCGGTTATGTGGT
GGAAACCGTCAGAGACGGCGAGGAAGCCTGGTTCCGCGGCGACACCGAGGACTATGCGGCGATCGTCCTCGATCTCGGGT
TGCCCGGCATGGACGGCCTCGCCGTTCTGAAGCGCTGGCGCGGCAACGATCGCCGCACCCCGGTGTTGATCCTGACCGCG
CGCGGCAGCTGGGCGGAGCGGGTCGACGGCATCGACGCCGGCGCCGACGATTACTTGCCGAAGCCGTTCCGGATGGAGGA
GTTGCTGGCGCGGCTGCGCTCGATCGTGCGTCGCTCGGCCGGGCAGGCCTGCTCGGTGATCAGCGTCGGCGACGTCACGC
TCGACGAGCGGCAGATGAAGGTCGACGTCGGCGGCGTGCCGGTCAACCTGTCGCCGCTGGAATACCGGCTGATCGCGTTT
CTGTTCCTGCATCGCGGCCGCGTAGTGTCGCAGGCCGAACTCAGCGAGAATATCTATGGCAACGAGGACGCCCACGATTC
CAACGCCATCGAGGTGCTGATCGGCCGGGTGCGCAAGAAGCTCGGCAGCGAGCTGATCGAAACCCGCCGCGGCTTCGGCT
ATCTGGTGGCGGGTTCCGGCACATGA

Protein sequence : 
MRVLVVEDDRRIAADLERGLQAAGYVVETVRDGEEAWFRGDTEDYAAIVLDLGLPGMDGLAVLKRWRGNDRRTPVLILTA
RGSWAERVDGIDAGADDYLPKPFRMEELLARLRSIVRRSAGQACSVISVGDVTLDERQMKVDVGGVPVNLSPLEYRLIAF
LFLHRGRVVSQAELSENIYGNEDAHDSNAIEVLIGRVRKKLGSELIETRRGFGYLVAGSGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-29 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPC_4932 YP_534773.1 two component transcriptional regulator NC_002516.2.879194.p Protein 1e-40 44
RPC_4932 YP_534773.1 two component transcriptional regulator BAC0487 Protein 2e-35 43
RPC_4932 YP_534773.1 two component transcriptional regulator CP000647.1.gene1136. Protein 2e-37 42
RPC_4932 YP_534773.1 two component transcriptional regulator BAC0530 Protein 2e-37 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPC_4932 YP_534773.1 two component transcriptional regulator VFG1389 Protein 2e-28 42