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Name : RPC_4766 (RPC_4766) Accession : YP_534607.1 Strain : Rhodopseudomonas palustris BisB18 Genome accession: NC_007925 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 5328136 - 5330196 bp Length : 2061 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGCGATGGCAGCCGATCGGTACGGCGGGCCGCAACGTTCATGATCCTCTCACTCAGGCGGTAGCTCTCATGACGCAGGT CGATTCCTCCCGTATGGCCAATGCAATCCGCGCGCTGGCGATGGACGCCGTGGAGAAGGCGAAGTCCGGCCACCCCGGAT TACCGATGGGCGCCGCCGACATCGCCACCGTGTTGTTCAGCCAATTCCTGAAATTCGACGCCGAGGACCCGCGCTGGCCG GATCGCGACCGCTTCGTGCTGTCCGCCGGGCACGGCTCGATGCTGCTCTACGCGCTGTTCTATCTGACCGGCAATGAGGA CGTCACGCTCGACCAGATCAAGAATTTCCGCCAGCTCGACTCCAAGACTCCCGGCCATCCGGAGAACTTCATCACCGCCG GCGTCGAGACCACCACCGGCCCGCTCGGCCAGGGCGTGGCGTCGTCGGTCGGGACTGCATTGGCCGAGCGGCTGCTGGCG GCGGAGTTCGGCGACGACATCGTCGACCACTACACCTACGTGCTGTGCTCCGACGGCGACCTGATGGAGGGCGTCAGCCA CGAGGCGATCGCGCTCGCCGGCCACCTCAAGCTATCCAAGCTGATCTTCCTCTACGACGACAACGGCATCTCGATCGACG GTCCGCTGACGTTGTCGGACAGCGTCGACCAGGTCGCCCGCTTCAAGGCGCACGGCTGGAACGCGGTGCAGATCGACGGC CACGACCAGAAGGCGATCGCCGCAGCCATCACCCAGGCGCAGAGCTCCGATCGTCCGACGATGATCGCCTGCAAGACCAC GATCGGATTCGGCGCGCCGCACAAGGCCGGCACCTCCAAGGCCCACGGCGAGCCGCTCGGCGCTGAGGAATTGGCCGGCG CCAAGAAGGCGCTGGGCTGGAATTACGGCCCGTTCGAGATCCCCGAGGACGTGCTGCACGCCTGGCGCAATGTCGGCCGC GAAGGCGCCAGCGCCCATGCCGATTGGCGACAGCGTTTCGAGGCGATGGAAGACACCAAGCGCAGCGAATTCCAGCGCCG GGTGGTCGATCGCAAGCGCCCCGAGGTGCTCGGCGACACCATCCGGGCGCTGAAAGACAAGCTGGTCGCCGAGCCGCAGA CCATCGCCACCCGCAAGGCCAGCGAACTGGTGCTGGAGGCGATCGAGCCGATCATGCCGGAATTGCTGCTCGGCTCGGCC GATCTGACGCCGTCCAACAACACCCGCGTCAAGTCCGCCAAGGACGTCAAGCCGGGGGATTTTTCCGGCCGCTACATCCA TTACGGCATCCGCGAAATGGGCATGGCGGCGGCGATGAACGGTATCTCCGCGCATGGCGGCTTCGCTCCGGCCGGCGGTA CTTTCATGTGTTTCACCGACTATGCGCGCCCTTCGATGCGGATCGCGGCGCTGTCGCACACCCCGGTGGTCTACATCATG ACCCACGATTCCATCGGGCTCGGCGAAGACGGCCCGACCCACCAGCCGGTGGAGCATCTGGCGTCCTTGCGGGCGATGCC GAACCTGCGGCTGTTCCGCCCGGCCGATCCGGTCGAGACCGCCGAATGCTGGCAGCTGGCGCTGGAATATACCACCGGCC CGACCGTGCTGGCGCTGTCGCGGCAGAATCTGCAGCCGGTTCGCACCACCTCCCACCCGGACAATCTCTGCGCGCAGGGC GCCTACGAGCTGGTCGCCGCCGACGGCGCGGCCGAAGTGTCGCTGTTCGCCTCCGGCTCCGAGGTGGAAATCGCGGTGGC CGCGCAGAAGCTATTGGCGGAGCGCGGCATCCCGACCCGGGTGGTCTCGGTACCCTCGCTCGACCTGCTGCTGCTGCAGA AGGACGAGGTTCGCCATGGCATCATCGGCGAGGCGCGGGTCAAAGTCGCGGTCGAGGCCGCGGTGCGGTTCGGCTGGGAC GCGGTGATCGGGCCGGACGGCGGCTTCGTCGGCATGAGTTCGTTCGGCGCCAGCGCCCCGGCGAAGGACCTCTACAAGCA TTTCGGCATCACCGCGGAGGCCGTGGTGAAGGCCGCCACCGAACGGCTGCAGCGGAACTAG Protein sequence : MRWQPIGTAGRNVHDPLTQAVALMTQVDSSRMANAIRALAMDAVEKAKSGHPGLPMGAADIATVLFSQFLKFDAEDPRWP DRDRFVLSAGHGSMLLYALFYLTGNEDVTLDQIKNFRQLDSKTPGHPENFITAGVETTTGPLGQGVASSVGTALAERLLA AEFGDDIVDHYTYVLCSDGDLMEGVSHEAIALAGHLKLSKLIFLYDDNGISIDGPLTLSDSVDQVARFKAHGWNAVQIDG HDQKAIAAAITQAQSSDRPTMIACKTTIGFGAPHKAGTSKAHGEPLGAEELAGAKKALGWNYGPFEIPEDVLHAWRNVGR EGASAHADWRQRFEAMEDTKRSEFQRRVVDRKRPEVLGDTIRALKDKLVAEPQTIATRKASELVLEAIEPIMPELLLGSA DLTPSNNTRVKSAKDVKPGDFSGRYIHYGIREMGMAAAMNGISAHGGFAPAGGTFMCFTDYARPSMRIAALSHTPVVYIM THDSIGLGEDGPTHQPVEHLASLRAMPNLRLFRPADPVETAECWQLALEYTTGPTVLALSRQNLQPVRTTSHPDNLCAQG AYELVAADGAAEVSLFASGSEVEIAVAAQKLLAERGIPTRVVSVPSLDLLLLQKDEVRHGIIGEARVKVAVEAAVRFGWD AVIGPDGGFVGMSSFGASAPAKDLYKHFGITAEAVVKAATERLQRN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 5e-140 | 51 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-130 | 47 |
