Gene Information

Name : RPC_4521 (RPC_4521)
Accession : YP_534362.1
Strain : Rhodopseudomonas palustris BisB18
Genome accession: NC_007925
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator, AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 5045928 - 5046143 bp
Length : 216 bp
Strand : +
Note : -

DNA sequence :
ATGCCAGAACCAGATCGTATCATCCGCCTGAAAACCGTTCTGTCCCGGACCGGCCTGTCCCGGTCCACCATCTACCGCAA
GATCACCGAGGGGACATTCCCGGCCCAGATCAGGATCAGCGTCAACGGCGCAGGCTGGCGGGAATCCGACATCAACCGAT
GGATCGCAGACCCCGTGGCGTGGCGGCCGAAACACGAGTTCGACGATGCCCGGTGA

Protein sequence :
MPEPDRIIRLKTVLSRTGLSRSTIYRKITEGTFPAQIRISVNGAGWRESDINRWIADPVAWRPKHEFDDAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 2e-09 42
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 1e-09 41
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 1e-09 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPC_4521 YP_534362.1 phage transcriptional regulator, AlpA VFG1141 Protein 3e-10 41