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Name : RPC_4490 (RPC_4490) Accession : YP_534332.1 Strain : Rhodopseudomonas palustris BisB18 Genome accession: NC_007925 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : - COG ID : - EC number : - Position : 5001868 - 5003361 bp Length : 1494 bp Strand : + Note : - DNA sequence : ATGGACCATCGTCGAACCCATCCTCAGCACACTGCCGCCGCCAAAGCGGGAATCAGCGAACGCTCGGCTCGTCGGATCGA TCGCGATCCAACCTTGCCATCGCAGCGCAAGACACCCCGAGGTTATCGGACCCGTCCCAACCCGTTCGACGGCGTTTGGG AAGCCGATATCGTGCCGCTGCTGCAATCGATGCCGTCGCTGCAGGCCATCACCATTTTGCGCGAGCTGCAGCGGCGTCAT CCCGGCCGCTTTCCCGACAGCCATTTGCGAACCCTGCAGCGCCACATGCGGCGGTGGAGCGCACTCGCCGGCCCCGAGCG CGACGTCATCTTCCGTCAGGAGCATCCGCCCGGTGCGCAGGGCCTTTCCGACTTCACCGATGCGGGCGAGCTTGGTGTGA CGATGGTTGGGCTCGCCTTTCCGCATCGCTTCTATCACTTCGCGCTGGCCCATTCGCAGTGGGAGTACGCCCGCGTGGTC GAGGGCGGGGAAAGCTTCTCGGCGCTTGCCGAGGGGCTCCAGAACGCGCTCTGGCTGCTCGGGGGGGCCCCGCGCGAGCA TCGCACCGACAGCCTCTCGGCTGCGTTCAAGAACCTCTCGGAGGAGGAGGACTTCACGCGCGCCTATCGTGAACTTTGTG ACCATTACGGCATGGCGGCGACCCGCAACAATCGCGGTGTCAGTCATGAGAACGGCTCGATCGAAAGCCCGAATCGCCAC CTCAAGAAGGCGCTCGATCAGGCGCTGACGCTGCGCGGTAGCCGTGACTTCGATACTCGGGTGGCCTATCAGGCATTCAC CGACGACATCGTCGGCCAACGCAATGCCGCCCGCGACCAGGCCTTCGCAGCCGACCGCGCCGCCCTGCGGGCGCTGCCGC CGCGCCGCACCACGGACTTCAGCGAGGCTGCCGTGGTGGTCACGTCCTCCAGCATGTTCTGTCTGCGCAAGGTGTTCTAC ACGGTGCCGTCGCGTTTGATCGGCCATCGCCTCAAGGTGCACCTCTACGACGATCGGCTCGACTGCTTCCTCGGCTCGAC GCAGGTGCTCGTGCTGCCGCGCGGCCGGGTGCCGCGGGGGGCCCAACGCGGACACGTCGCCGACTACCGGCACGTGCTGC CGAGCCTTCGGCGCAAACCCCAGGCCTTGCGCAACCTGGTATGGCGTGACGCGCTGTTCCCGCGGCCGGCGTTCCGCCGG GCCTGGGACACGCTGGTCGAGCGAGGCCCGATCGACCGGGCTTGTCGCACCATGGTGGCGTTGCTCGACATCGCCTATTG CAGCGGTTGCGAAGCAGAACTCGCCGCGCATATCGACAGCGTGCTCGATCTCGGCCACCTGCCGGATCCCAACGCCCTGC GGGCTGTGTTCAGCCGCGATGCCGCGGCTCAAAACGGCGGGGCGGCATTGCCCACGGTGGCCGTCACGATGCCGGCCGCG TTGATCTACGACGTGCTGCTGTCCAGCGTCCACGGCGAGGTGTCGTCATGCTGA Protein sequence : MDHRRTHPQHTAAAKAGISERSARRIDRDPTLPSQRKTPRGYRTRPNPFDGVWEADIVPLLQSMPSLQAITILRELQRRH PGRFPDSHLRTLQRHMRRWSALAGPERDVIFRQEHPPGAQGLSDFTDAGELGVTMVGLAFPHRFYHFALAHSQWEYARVV EGGESFSALAEGLQNALWLLGGAPREHRTDSLSAAFKNLSEEEDFTRAYRELCDHYGMAATRNNRGVSHENGSIESPNRH LKKALDQALTLRGSRDFDTRVAYQAFTDDIVGQRNAARDQAFAADRAALRALPPRRTTDFSEAAVVVTSSSMFCLRKVFY TVPSRLIGHRLKVHLYDDRLDCFLGSTQVLVLPRGRVPRGAQRGHVADYRHVLPSLRRKPQALRNLVWRDALFPRPAFRR AWDTLVERGPIDRACRTMVALLDIAYCSGCEAELAAHIDSVLDLGHLPDPNALRAVFSRDAAAQNGGAALPTVAVTMPAA LIYDVLLSSVHGEVSSC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| r6 | AAC61728.1 | transposase R6 | Not tested | PAI I CFT073 | Protein | 8e-79 | 42 |
| unnamed | AAL67386.1 | R6-like protein | Not tested | PAI II CFT073 | Protein | 8e-79 | 42 |
| unnamed | AAL67341.1 | R6-like protein | Not tested | PAI II CFT073 | Protein | 4e-79 | 42 |
| c3607 | NP_755482.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 9e-79 | 42 |
| c5144 | NP_756992.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 9e-79 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RPC_4490 | YP_534332.1 | integrase catalytic subunit | VFG1728 | Protein | 4e-79 | 42 |
