Gene Information

Name : RPC_4311 (RPC_4311)
Accession : YP_534153.1
Strain : Rhodopseudomonas palustris BisB18
Genome accession: NC_007925
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4813092 - 4813757 bp
Length : 666 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCATTCTGCTGATCGAGGACGATACCCGGCTGGCGCGGCAGATCGCCGAGGCGCTCGAGCGCGCCGGCTACACCGT
CGATCGCAGCGCCGACGGCGAGGACGGCTGGTTCATGGGCGACAGCGGGGTCTATGACGCCGCGATTCTCGACCTCGGGC
TGCCGGGGCTCGACGGGCTCTCTGTGCTGCGGCGCTGGCGCGACGCCAAGCGCGCGATGCCGGTGCTGATCCTGACCGCG
CGGGCGTCGTGGCGCGAAAAGGTCACCGGGCTGCGCGAAGGCGCCGACGACTATCTCACCAAGCCGTTCGAGATCGAAGA
ACTGCTGGCGCGGATCGAGGCGCTGATCCGGCGTGCCTCGGGCCACGCCACCGCGGAGATCAGCGTCGCCGGGCTCAGGC
TCGATCCATCGACGCAACGCATCAGCCGCGATGGCGCGCCGCTCGATCTCACCGCGCTGGAATATCGCGCGCTGGCCTAT
CTGATGATGCACCCGGCCAAGGTGGTGTCGAAGACCGAACTCACCGAGCACATCTACGGCCAGGACGACGACCGCGATTC
CAACGTCATCGAGGTTCTGGTCAACCGGCTGCGCAAGAAGATCGGCGCCGATGCGATCCGCACCCGGCGCGGTCAGGGCT
ACCAGCTGGCGGACGTGACGCCATGA

Protein sequence : 
MRILLIEDDTRLARQIAEALERAGYTVDRSADGEDGWFMGDSGVYDAAILDLGLPGLDGLSVLRRWRDAKRAMPVLILTA
RASWREKVTGLREGADDYLTKPFEIEELLARIEALIRRASGHATAEISVAGLRLDPSTQRISRDGAPLDLTALEYRALAY
LMMHPAKVVSKTELTEHIYGQDDDRDSNVIEVLVNRLRKKIGADAIRTRRGQGYQLADVTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPC_4311 YP_534153.1 two component transcriptional regulator CP004022.1.gene1005. Protein 2e-31 46
RPC_4311 YP_534153.1 two component transcriptional regulator CP000647.1.gene1136. Protein 5e-30 46
RPC_4311 YP_534153.1 two component transcriptional regulator BAC0530 Protein 5e-30 46
RPC_4311 YP_534153.1 two component transcriptional regulator NC_002516.2.879194.p Protein 8e-32 45
RPC_4311 YP_534153.1 two component transcriptional regulator CP001138.1.gene1939. Protein 1e-29 45
RPC_4311 YP_534153.1 two component transcriptional regulator CP000034.1.gene2022. Protein 2e-29 45
RPC_4311 YP_534153.1 two component transcriptional regulator CP001918.1.gene2526. Protein 4e-29 45
RPC_4311 YP_534153.1 two component transcriptional regulator NC_002695.1.913289.p Protein 1e-28 44
RPC_4311 YP_534153.1 two component transcriptional regulator BAC0487 Protein 6e-23 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPC_4311 YP_534153.1 two component transcriptional regulator VFG0475 Protein 1e-29 45
RPC_4311 YP_534153.1 two component transcriptional regulator VFG0473 Protein 7e-24 43