Gene Information

Name : RPC_4007 (RPC_4007)
Accession : YP_533852.1
Strain : Rhodopseudomonas palustris BisB18
Genome accession: NC_007925
Putative virulence/resistance : Resistance
Product : sulfate transport system permease 1
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1118
EC number : -
Position : 4455196 - 4456245 bp
Length : 1050 bp
Strand : -
Note : -

DNA sequence : 
GTGACGATTGAGGTTCGCAATATCGTAAAGCGCTTCGGCGCCTTCACCGCGCTGGACAATGTCGACCTGCGGGTCGAGAC
CGGCGAGCTGTTGGCGCTGCTCGGTCCCTCGGGCTCCGGCAAGACCACGCTGCTGCGCATCATCGCCGGGCTGGATTGGC
CCGACGCCGGCTCGGTGTCGTTCGACGGCGAGGACGCGCTGTCGCGCGGCGCCGGCGAGCGCCATGTCGGCTTCGTGTTC
CAGCACTACGCGCTGTTCCGCCATATGAGCGTGTTCGAGAACGTCGCTTTCGGGCTGCGGGTGCAGCCGCGCAGCATTCG
TAAATCCGAGGCGCAGATCAAGGCGCGGGTCAAAGACCTGTTGGACCTGGTGCAGCTCGACTGGCTGGCCGACCGTTATC
CGAGCCAGCTCTCCGGCGGCCAGCGCCAGCGCATCGCGCTGGCGAGAGCGCTGGCGATCGAACCGCGCATCCTGTTGCTC
GACGAGCCGTTCGGCGCGCTCGACGCCAAGGTGCGTAAAGAGCTGCGCAAATGGCTGCGCACGCTGCACGAGGAAATCCA
CGTCACCTCGATCTTCGTCACCCACGACCAGGAAGAGGCGCTGGAAGTCGCCAACCGCGTGGTGGTGATGGACAAGGGCA
GGATCGAACAGATCGGCAGCCCCGGCGACGTCTATGAGGACCCGGCGACCGCCTTCGTGCACGGCTTCATCGGCGAATCC
ATCGTGCTGCCGGTCGACATCCGCGACGGACGGGTGCGGCTCGGCGACCGCGAGCTCAACCTGGACTCTCGCGACGCCCG
GCCGGGGCCGTCGAAACTGTTCATCCGCCGCCACGATCTGGCGATCGGGCCGTCCGGCGCCGGCGCGCTGGAAGGTGCGG
TGAAGCACGTCCGCGCCTTCGGGCCGACGCAGCGCGCCGACATCCTGCTCAGCGCGGTGGGCGAGGGCACGCTGATCGAG
ATCGACGCGCCGCGCGATCGCGACCTGAAACCCGGCGACATCGTCAGCCTGCAGCCGCGCCGCTACCGGATTTTCGCCGA
GACGGGTTAG

Protein sequence : 
MTIEVRNIVKRFGAFTALDNVDLRVETGELLALLGPSGSGKTTLLRIIAGLDWPDAGSVSFDGEDALSRGAGERHVGFVF
QHYALFRHMSVFENVAFGLRVQPRSIRKSEAQIKARVKDLLDLVQLDWLADRYPSQLSGGQRQRIALARALAIEPRILLL
DEPFGALDAKVRKELRKWLRTLHEEIHVTSIFVTHDQEEALEVANRVVVMDKGRIEQIGSPGDVYEDPATAFVHGFIGES
IVLPVDIRDGRVRLGDRELNLDSRDARPGPSKLFIRRHDLAIGPSGAGALEGAVKHVRAFGPTQRADILLSAVGEGTLIE
IDAPRDRDLKPGDIVSLQPRRYRIFAETG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-29 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPC_4007 YP_533852.1 sulfate transport system permease 1 BAC0604 Protein 3e-29 41