Gene Information

Name : RPC_3723 (RPC_3723)
Accession : YP_533577.1
Strain : Rhodopseudomonas palustris BisB18
Genome accession: NC_007925
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 4143464 - 4145101 bp
Length : 1638 bp
Strand : -
Note : -

DNA sequence :
ATGGACGTCCTCAACCAGCCGCTGCTCGACGTCCGCGACCTCTCGGTGGCGTTTCACCAGCCGAGCGGGCAATCGATCGC
GGTCGATCATATTTCCTTCGAGATCAAGCGCGGCGAATGCGTGGCGCTGGTCGGCGAATCCGGCTCCGGCAAATCGGTCA
GCGCGCTGTCGATCCTGCGGCTGTTGCCGTATCCGACCGCGTCGCATCCCTCGGGCAGCATCCGTTTCAAGGGCCGCGAA
CTGCTCAACCTGTCGGAGCACGACATTCGCTCGGTGCGCGGCAACGACATTTCGATCATCTTCCAGGAGCCGATGACCTC
GCTCAATCCGCTGCATACCATCGAGTCGCAGATCGGCGAGATCTTGCAGCTGCATGGCGGCGTGCGCGGCGACAAGGCGC
GGGCCCGGATCCTGCAACTGCTGACCCAGGTCGGCATTCCGGAGCCGGAGACCCGGCTCGGCAGCTATCCGCATCAATTG
TCCGGCGGCCAGCGCCAGCGGGTGATGATCGCGATGGCGCTCGCCAACGAGCCGGACCTGTTGATCGCCGACGAGCCGAC
CACCGCGCTCGACGTCACCGTGCAGGCGCAGATCCTGGCGCTCCTGGCGGAGATCCGCGCAAGGCTCGGCATGAGTCTGT
TGTTCATCACCCACGACCTCGGCATCGTGCGCCGCATCGCTGACGTGGTCTGCGTGATGCATAACGGCAAGATCGTCGAG
CAGGGGCCGGTCGAGCAGGTGTTCACCGCGCCGCAGCATCCCTACACGCGCGCGCTGCTCGCCGCCGAGCCGAAGCCCGA
TCCGGCGCCGCCGCGGCCCGACGCGCCGGTGGTGATGTCGACCGACGACCTGAAAGTCTGGTTTCCGATCAAGCGCGGGT
TGATGCGCAAGACGGTAGGCCACATCAAGGCGGTCGACGGCGTCAGCCTCAGCGTCCGCAAGGGCGAGACGCTCGGCGTG
GTCGGCGAGTCCGGCTCCGGCAAGACCACGCTGGGCCTGGCCTTGTTGCGGCTGATTTCCTCGGACGGTCCGATCGTCTT
CCTCAGCAACAATATCCAGGGCCTGAAATTCAAGGCGATGCGGCCGTTCCGCCGCGACATGCAGATCGTGTTTCAGGATC
CATTCGGCGCGCTCAGCCCCAGGATGTCGGTCGGCGATATCGTCGCCGAAGGCCTCAGCGTGCATCAGCCGTCGTTGTCG
CAGGTCGAGCGCGACACTCGCGTGGTCAAGGCGCTGCAGGATGTCGGGCTCGATCCGGCGACGCGATTTCGCTATCCGCA
CGAGTTCTCCGGTGGCCAGCGCCAGCGCATCTCGATCGCCCGCGCGGCGGTGCTGGAACCGAGCTTCGTGGTGCTGGACG
AGCCGACCAGCGCGCTCGACATGCTGTTCCAGGCGCAGATGGTCGATCTGTTGCGCGACCTGCAGCGCAAGCGCGACCTG
ACCTACATGTTCATCTCGCACGATCTGCGGGTGGTCGCCTCGCTGGCCAGCCATCTGATCGTGATGCGCCAGGGCAAGGT
GGTCGAGGAGGGGCCGGCATCGGAGCTGTTCGCGCAGCCGAAGACCGACTATACCCGCGCGTTGTTCGCCGCCGCGTTCC
GCATCGAGACCGCGGCGGGCGGCCCTGCGACGCCATGA

Protein sequence :
MDVLNQPLLDVRDLSVAFHQPSGQSIAVDHISFEIKRGECVALVGESGSGKSVSALSILRLLPYPTASHPSGSIRFKGRE
LLNLSEHDIRSVRGNDISIIFQEPMTSLNPLHTIESQIGEILQLHGGVRGDKARARILQLLTQVGIPEPETRLGSYPHQL
SGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILALLAEIRARLGMSLLFITHDLGIVRRIADVVCVMHNGKIVE
QGPVEQVFTAPQHPYTRALLAAEPKPDPAPPRPDAPVVMSTDDLKVWFPIKRGLMRKTVGHIKAVDGVSLSVRKGETLGV
VGESGSGKTTLGLALLRLISSDGPIVFLSNNIQGLKFKAMRPFRRDMQIVFQDPFGALSPRMSVGDIVAEGLSVHQPSLS
QVERDTRVVKALQDVGLDPATRFRYPHEFSGGQRQRISIARAAVLEPSFVVLDEPTSALDMLFQAQMVDLLRDLQRKRDL
TYMFISHDLRVVASLASHLIVMRQGKVVEEGPASELFAQPKTDYTRALFAAAFRIETAAGGPATP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 9e-80 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-80 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-80 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-80 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 5e-90 43