Gene Information

Name : RPC_3193 (RPC_3193)
Accession : YP_533054.1
Strain : Rhodopseudomonas palustris BisB18
Genome accession: NC_007925
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3533284 - 3534714 bp
Length : 1431 bp
Strand : -
Note : -

DNA sequence :
ATGGTCAACCGCATGCAATTCTACATCGATGGCGCTTGGGTCGATCCCGTCGTCAAGAAATCGACGCCGGTGGTCAATCC
GGCGACCGAGGAAGCGATGTATGAGGTTGCGCTCGGTTCGAAGGCCGATGTCGACAACGCCGTCGCCGCCGCCAAGCGCG
CGTTCGAAACCTTCTCGCAGACCAGCCGCGAGCAGCGGGTGGCGCTGCTGGAGAAGATTATTGCGGTCTACAAGACCCGC
ATGAAAGATATCGGCGCCGCGGTGTCCGACGAGATGGGCGCGCCGTTGCCGTTCGCGGAGAAATTCCAGGCCGGCGCCGG
CCTCGGCCATATCGCCTCCACGCTGGAGGTGTTGAAGACCTACAATTTCGAAGAGCCGCTCGGCAACGCCGTGGTGGTAC
GCGAGCCGGTCGGCGTCATCGGCATGATCACGCCGTGGAATTGGCCGCTCAATCAGATCGCCTGCAAGGTCGCGCCGGCG
CTGGCCGCCGGTTGCACCATGATCCTGAAGCCCTCCGAATTCACCCCGTCGTCGGCGCTGATCTTCGCCGAGATCTTGCA
TGAAGCCGGCGTGCCGAACGGCGTGTTCAACCTCGTCAACGGTCTCGGCCCAGAGGTCGGCGCGGCGATGAGCGAGCATC
CGGACATCGACATGATTTCCTTCACCGGCTCGACCCGCGCCGGCATCGACGTCGCCAAGCGCGCGGCGCCGACGGTGAAG
CGGGTCAGCCAGGAGCTCGGCGGCAAGTCGCCGAATATCATTCTGGAAGACGCCGATCTGCAGAAGGCGGTGGCCGGCGG
CGTGGCGCACATGTTCAACAATTCCGGACAGTCCTGCAACGCACCGAGCCGGATGATTGTGCCGCAGTCGAAGATGAAAG
AAGTCGCTGCGATCGCAAAGGCGGTGGCTGACAAGACCAAGGCGGGCGATCCGCGCGCCGAGGGCACCAGCATCGGTCCG
GTGGTGTCGCGGATTCAGTGGGACAAGATCCAGGCGCTGATTCAGAAGGGCGTCGAAGAAGGCGCCACGCTGGTGGCCGG
CGGGCCGGGCCTGCCGGAAGGCGTCAACAAGGGATTCTATGTGCGTCCCACGGTGTTCGCCGACGTCACCAACGACATGA
CCATTGCGCGCGAAGAAATCTTCGGGCCGGTGATCGCGATCATCGGTGCCAAGGACGAAGCCGACGCGGTGAAGATCGCC
AACGACACGCCGTATGGTCTGGCTGGTTATGTGTCGGCTGGTAGCGTCGAGCGCGCGCGCGCGGTCGGCCGCAAACTACG
CGCCGGCAACGTCAACCTCAACGGCGTGCCGAACGAACGCACCGCGCCGTTCGGCGGCTACAAGCAATCCGGCAACGGCC
GCGAATGGGGCAAATTCGGGCTCGAGGAATATCTCGAGGTCAAGGCGATCGCCGGCTACAACGCCGCGTAA

Protein sequence :
MVNRMQFYIDGAWVDPVVKKSTPVVNPATEEAMYEVALGSKADVDNAVAAAKRAFETFSQTSREQRVALLEKIIAVYKTR
MKDIGAAVSDEMGAPLPFAEKFQAGAGLGHIASTLEVLKTYNFEEPLGNAVVVREPVGVIGMITPWNWPLNQIACKVAPA
LAAGCTMILKPSEFTPSSALIFAEILHEAGVPNGVFNLVNGLGPEVGAAMSEHPDIDMISFTGSTRAGIDVAKRAAPTVK
RVSQELGGKSPNIILEDADLQKAVAGGVAHMFNNSGQSCNAPSRMIVPQSKMKEVAAIAKAVADKTKAGDPRAEGTSIGP
VVSRIQWDKIQALIQKGVEEGATLVAGGPGLPEGVNKGFYVRPTVFADVTNDMTIAREEIFGPVIAIIGAKDEADAVKIA
NDTPYGLAGYVSAGSVERARAVGRKLRAGNVNLNGVPNERTAPFGGYKQSGNGREWGKFGLEEYLEVKAIAGYNAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-50 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPC_3193 YP_533054.1 aldehyde dehydrogenase VFG0082 Protein 2e-50 43