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Name : RPC_3056 (RPC_3056) Accession : YP_532919.1 Strain : Rhodopseudomonas palustris BisB18 Genome accession: NC_007925 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 3387512 - 3389011 bp Length : 1500 bp Strand : + Note : - DNA sequence : ATGCTGACAGTGGAGACGGTGGCTCGGATTCGGCGTGAGCATTTTCTCAAGGGCAAGACGATCAAGGAGATCGCCCGGGA TCTGAGGGTGTCGCGGAACACGGTCCGCAAGGTGCTGCGGTCCGGTGAGACGTCATTCGAGTATGGGCGCGAGGTTCAAC CGCGACGGAAGCTTGGCCGATGGACGGCTGAGCTCGATGCACTGCTTGCAAGCAACGCTGCGAAGGCCGCCCGCGAGCAA TTGACGCTGATCCGGATCTTCGAAGAGCTGCGTGGGCGAGGCTATGACGGCGGCTACGATGCTGTGCGTCGCTACGCCCG CCACTGGGCCAAAGAGCGAGGCCAGGCGACGGCCGCGGCCTATGTGCCGCTGAGCTTTGCGCCGGGAGAAGCCTACCAGT TCGACTGGAGCCACGAAGTCGTGCTGCTCGGCGGGGTGACGGTGATCGTCAAGGTCGCCCATGTCCGGCTCTGTCACAGC CGCATGCTGTTGGTGCGCGCTTATCCGCGCGAGACGCAGGAGATGGTGTTTGACGCCCATGACCGGGCGTTCGCACTGTT CAAGGGGACCTGCGGGCGCGGCATCTACGACAACATGAAGACGGCGGTTGAGACGATCTTCGTCGGCAAGGCCCGTCTTT ACAATCGCCGCTTCATGCAGATGTGCAGCCACTATCTGGTTGAGCCGGTCGCCTGCACACCGGCGTCGGGCTGGGAGAAG GGCCAGGTCGAGAACCAGGTCGGCCTGGTGCGCGAGCGGTTCTTTACGCCGCGGCTGCGGTTCAAGAGCTATGACGAGAT GAACGCCTGGCTCACCGACAAATGCATCGCCTACGCCAAGGCGCATCGCCATCCGGAGTTGACCGAGCAAACGATCTGGG AGGTATTTGAAGCCGAGCGGCCGAAGCTCGTCCCCTATGCCGGCCGGTTCGATGGATTCCATGCGGTGCCGGCATCGGTC TCCAAGACCTGCCTGGTGCGCTTCGACAACAACAAATACTCTGTGGCGGCGAGCGCCGTCGGGCGTCCGGTCGAGGTTCA TGCCTATGCCGACCGTATCGTCATCCGACAGGACGGCCGCATCGTGGCCGAGCATCCTCGCTGCTTCGGCCGCGGCGAGA CCAGTTACGATCCCTGGCATTACGTGCCGGTGCTGGCGCGCAAGCCCGGGGCCTTGCGCAACGGTGCGCCGTTCAAGGAC TGGGTGCTGCCGGCCGCGATGGAGCGAGTGCGGCGCAAGCTCGCCGGCGTCGTCGATGGCAATCGGCAGATGGTCGACAT CCTCAATGCGGTGCTAACCGACGGGCTGCCGGCGGTTGATGCCGCCTGCGCCGAAGCTGTCGATCACGGCGTTCATTCCG CCGACGCCATCCTCAACATCCTGGCGCGCCAGCGCGATCCCACGCCGCCGGCCAACATCCTTACGCCCGCCGCGCTGACA TTGCGCCACGCGCCGCTCGCCGATTGTGCCCGTTACGACAACCTGAGGAGAACCGTCTGA Protein sequence : MLTVETVARIRREHFLKGKTIKEIARDLRVSRNTVRKVLRSGETSFEYGREVQPRRKLGRWTAELDALLASNAAKAAREQ LTLIRIFEELRGRGYDGGYDAVRRYARHWAKERGQATAAAYVPLSFAPGEAYQFDWSHEVVLLGGVTVIVKVAHVRLCHS RMLLVRAYPRETQEMVFDAHDRAFALFKGTCGRGIYDNMKTAVETIFVGKARLYNRRFMQMCSHYLVEPVACTPASGWEK GQVENQVGLVRERFFTPRLRFKSYDEMNAWLTDKCIAYAKAHRHPELTEQTIWEVFEAERPKLVPYAGRFDGFHAVPASV SKTCLVRFDNNKYSVAASAVGRPVEVHAYADRIVIRQDGRIVAEHPRCFGRGETSYDPWHYVPVLARKPGALRNGAPFKD WVLPAAMERVRRKLAGVVDGNRQMVDILNAVLTDGLPAVDAACAEAVDHGVHSADAILNILARQRDPTPPANILTPAALT LRHAPLADCARYDNLRRTV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 4e-108 | 49 |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 2e-80 | 42 |
