Gene Information

Name : RPC_0198 (RPC_0198)
Accession : YP_530092.1
Strain : Rhodopseudomonas palustris BisB18
Genome accession: NC_007925
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 215596 - 216351 bp
Length : 756 bp
Strand : +
Note : -

DNA sequence :
ATGGACAGTTTCATCAAAGCCTCTTCGCCGCAGGGCCAAGCACCCGACACCCGAGCGCCCGACAGCATTGTCATCTCCAA
CGTCGACCTGTCGCTCGGCTCGGGCGCGGCGCGCGTGCATATCCTGAAGGATATCAGCCTGCGCGTCGGCTCCGGCGAGG
CAATCGGCCTGATCGGCCCCTCAGGATCGGGGAAATCCACGCTCCTGATGGTGATGGCGGGGCTGGAGCGCCCCGACAGC
GGTGAGGTGGTGGTCGACGGCACCGCATTCAATGCCTTGGACGAGGACGCGCTGGCGCGGTTTCGCGGCCGCCATGTCGG
CATCGTGTTCCAGTCGTTCCATCTGATCCCGACCATGACGGCGCTGGAAAACGTCGCGGTGCCGCTGGAATTGGCCGGCC
GCGCCGACGCCATGGAGCGCGCCGCGCGCGAACTCGCCGCGGTCGGCTTGAGCGAACGGCTGCACCACTATCCGACGCAG
CTCTCCGGCGGCGAGCAGCAACGCGTCGCCTTGGCCCGGGCGCTCGCGCCCGACCCCACCATCCTGGTCGCCGACGAGCC
GACCGGCAATCTCGACGAGGCCACCGGCCGGCAGATCGTCGATCTGTTGTTCGCCAACCACGCCGAACGCGGCATGACGC
TGGTTCTAGTCACCCACGACACCTCGCTGGCGCAGCGCTGCGACCGCGTGGTGCGGCTGCGCTCCGGCCGCATCGATGTC
GCGGCGCCCGACCGCGTCCGCGTGCAGACGGCGTAA

Protein sequence :
MDSFIKASSPQGQAPDTRAPDSIVISNVDLSLGSGAARVHILKDISLRVGSGEAIGLIGPSGSGKSTLLMVMAGLERPDS
GEVVVDGTAFNALDEDALARFRGRHVGIVFQSFHLIPTMTALENVAVPLELAGRADAMERAARELAAVGLSERLHHYPTQ
LSGGEQQRVALARALAPDPTILVADEPTGNLDEATGRQIVDLLFANHAERGMTLVLVTHDTSLAQRCDRVVRLRSGRIDV
AAPDRVRVQTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-28 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 43
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPC_0198 YP_530092.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-35 46
RPC_0198 YP_530092.1 ABC transporter-like protein NC_012469.1.7686878. Protein 8e-39 43
RPC_0198 YP_530092.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-37 42