Gene Information

Name : RPC_1001 (RPC_1001)
Accession : YP_530890.1
Strain : Rhodopseudomonas palustris BisB18
Genome accession: NC_007925
Putative virulence/resistance : Unknown
Product : IstB-like ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 1099996 - 1100829 bp
Length : 834 bp
Strand : -
Note : -

DNA sequence :
ATGCTGACGCGCGACAACACACCAGCGCCCATCACGGTCGATCTCGCTCGCCTGCCGATGCTGCTGACCTCCCTGCGGCT
GCCGACCATCGGCCAAATGTGGGCGGACCTCGCCGAGCGTTCAGACCGCGAAGGCTGGCCGGCCGCTCGCTATCTTGCGG
CCTTGCTCGAGCACGAGCTTGCCGAACGCTATCAACGTCGAATCCAGCGCAACATGCAGGACGCTCACCTGCCGGCGGGG
AAGAGCTTCGCCACCTTCGACTTCGCCGCCGTCCCGATGATCAACAAGAGCCAGATCACCGCGCTCGCGGCCGGCGGTTC
TTGGCTCGACAAAGGCGCCAATCTATTGGCCTTTGGCCCGCCAGGCGTTGGCAAGTCGCATCTCGGCGCAGCTCTCGGCC
AGGCTCTCATCGAAAACGGCTATCGTGTTCTGTTCACCCGCACGACCGACATGGTGCAACGACTTCAGGCCGCTCGCCGC
GATCTAACGCTGCAAAACGTCATGGAAAAGCTCGACAAATACGACCTGCTCATCCTCGATGACCTCTCTTACGTCCGCAA
GGATCAGGCCGAAACCAGCGTGCTCTTCGAACTCATCTCCGCCCGTTACGAGCGTCGCAGCTTGCTCATTACAGCTAATC
AGCCATTCGGGGGCTGGGAGGAAATCTTCCCCGACAAGGCAATGACCGTGGCCGCCATCGACCGCCTCGTGCACCACGCC
GTCATTCTGGAAATGAACACCGACAGTTATCGTCGCAAGGCCGCAGTCACGCGAATGACCGATCGGAAGGCCTCGGAAAA
CTCAAAGCAAAAGCCTGTAACCAAAACGATCTAA

Protein sequence :
MLTRDNTPAPITVDLARLPMLLTSLRLPTIGQMWADLAERSDREGWPAARYLAALLEHELAERYQRRIQRNMQDAHLPAG
KSFATFDFAAVPMINKSQITALAAGGSWLDKGANLLAFGPPGVGKSHLGAALGQALIENGYRVLFTRTTDMVQRLQAARR
DLTLQNVMEKLDKYDLLILDDLSYVRKDQAETSVLFELISARYERRSLLITANQPFGGWEEIFPDKAMTVAAIDRLVHHA
VILEMNTDSYRRKAAVTRMTDRKASENSKQKPVTKTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5145 NP_756993.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-41 44
c3608 NP_755483.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-41 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPC_1001 YP_530890.1 IstB-like ATP-binding protein VFG1729 Protein 8e-42 44