Gene Information

Name : Sde_0846 (Sde_0846)
Accession : YP_526320.1
Strain : Saccharophagus degradans 2-40
Genome accession: NC_007912
Putative virulence/resistance : Unknown
Product : UDP-N-acetylmuramoylalanine--D-glutamate ligase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0771
EC number : 6.3.2.9
Position : 1098911 - 1100281 bp
Length : 1371 bp
Strand : +
Note : -

DNA sequence :
ATGGCAAATTTAATAGCAACAGACAACCCGATAGTAGTGGTAGGCATGGGCCTTACCGGGCTATCGGTTGCGCGCTATTT
GGCCAACAAAGGCGCTAACTTCTTTTTATTAGACACGCGCAAAGATCTACCCAAGTCAACTTGGCAGCAAGTTGCAGAGC
TACAAGCCAAATGCCCTTCAATGAAGGTAGATAACGGTAGCTTAGATGTGGAGTTGTTAACCAGCGCCAAGCAAATTGTG
TTATCGCCAGGTGTGCCTTTGGCAACCCCAGAGATACAGCAGGCCAAAGCGGCAGGCGTAGAAATTATTGGTGATATCGA
TCTGTTTTTGGCTGAGCGCAAAGCGCCGGTTGTTGGTATTACTGGCTCCAACGGTAAAAGCACCGTAACCACATTGGTTG
GCTTGGCTGCAGAAAATGCAGGTATGAATGTAGCCGTAGGTGGCAACATCGGCGTACCGGTTTTAGATTTGTTAGCTGAT
GCCGACGTTGAGCTGTATGTGCTTGAGCTTTCTAGCTTTCAGTTAGAGTCGGTTAAGCGCGCGCAGTTAGATGTGGCATG
TGTGCTAAATGTATCGCCCGATCATATGGATCGCTACCCGTCGCTTGCGCACTACTGCCAAGCGAAGCAGCGTATTTATT
TTGGTGCGAAGAAAATTGTATATAACTTGGAAGATACATTAACAATTCCGCCAGTAATGGCTGGTGTTGAGCGTTACGGC
TTCTCTAGTAAGAAAGCCGTTGAAGAAAACGAAAAGCATGTACTGCTCAATAACGACACCAACGCATTGAGCCTAAATGG
GCAGGATGTTTTTTCTGTTGCTGATATTAAAATAGCTGGCGCGCACAATTTAAAAAATGCACTTGCTGCTTTGGCCATTT
GCGACGCAGCAAACATCCCGTTCGCCGGCTTGAAGCAAGCACTACAGGAATTTGAGGGGTTGCCTCACCGCTGTCAGTGG
GTGGCCAACAAAAATGGCGTTACTTATATAAACGATTCCAAGGCGACCAACATCGGTTCTGCCCAAGCGGCTATAGAAGG
GCTGGCGGGTCAGTTTAAAAATATCGTACTTATCGCCGGTGGCGATGGCAAGGGCGCAGATTTTTCTAGCCTAGGTAAAG
TAATAAACCAATATGTTTCGGCGGTTGTGTTAATTGGTGTAGATGCCCCCAAAATACAAGCAGTGGTAGACCCGCAAGTT
ATGTGTGTAAAAGCACAAACTTTAAATGCAGCGGTTAAACAGGCGGCACTATTGGCTAAATCTGGTGACTTAGTGTTGTT
GTCGCCAGCGTGTGCAAGCTTAGATATGTTTGCTAACTACGAAGCGCGCGGCCATGAGTTTGCGTTAACAGTTGCGGAGG
TGAGTGCGTGA

Protein sequence :
MANLIATDNPIVVVGMGLTGLSVARYLANKGANFFLLDTRKDLPKSTWQQVAELQAKCPSMKVDNGSLDVELLTSAKQIV
LSPGVPLATPEIQQAKAAGVEIIGDIDLFLAERKAPVVGITGSNGKSTVTTLVGLAAENAGMNVAVGGNIGVPVLDLLAD
ADVELYVLELSSFQLESVKRAQLDVACVLNVSPDHMDRYPSLAHYCQAKQRIYFGAKKIVYNLEDTLTIPPVMAGVERYG
FSSKKAVEENEKHVLLNNDTNALSLNGQDVFSVADIKIAGAHNLKNALAALAICDAANIPFAGLKQALQEFEGLPHRCQW
VANKNGVTYINDSKATNIGSAQAAIEGLAGQFKNIVLIAGGDGKGADFSSLGKVINQYVSAVVLIGVDAPKIQAVVDPQV
MCVKAQTLNAAVKQAALLAKSGDLVLLSPACASLDMFANYEARGHEFALTVAEVSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00311 YP_008207776.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR25 Protein 3e-61 42
BJAB0868_00315 YP_008211641.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR26 Protein 3e-61 42