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Name : Sde_0619 (Sde_0619) Accession : YP_526093.1 Strain : Saccharophagus degradans 2-40 Genome accession: NC_007912 Putative virulence/resistance : Virulence Product : UDP-glucose/GDP-mannose dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 781831 - 783114 bp Length : 1284 bp Strand : - Note : - DNA sequence : ATGCATAATAGAAAAATTTCCGTCATTGGATTGGGCTACGTAGGCCTACCTGTTGCCGTGGCTTTTGGTAAATCCCAACA GACCATTGGCTTTGATATAAACCAAGGCCGCGTAGAAGAGCTACAAAAGGGAACTGACCGCACCTTAGAGGTCACCAGCG AAGAACTCGCCCAAACAGACATACTGTTTACGTGCACCCCTGCCGACCTGCAAAAAGCCGATTTTCACATTGTAGCGGTA CCTACCCCCATCAACGATTCCAAACAACCCGACCTTCGCCCTCTCATAGGCGCTTCCAAAACTTTGGGGCCGCAATTGAA AAAAGGCGATATTGTTGTATATGAATCCACGGTATACCCTGGGGCCACCGAAGAAGATTGCGTACCCGTATTAGAAGCCG AATCTGGCCTTAAGTGCGGCGTCGACTTTTTTGTGGGCTACTCGCCAGAGCGTATCAACCCAGGCGACAAAGAGCACACC TTCACCAAAATCACCAAAGTGGTTTCTGGCCAAACACCTGAAGTATTAGAGATTGTTGCCGCGGTATACGGCAGTGTTGT AACCGCAGGCGTACACAAAGCAACAAGCATCAAAGTTGCCGAAGCCGCGAAGGTTATCGAAAACACTCAGCGCGACCTCA ATATCGCCCTTATGAACGAGCTATCAGTTATCTTTAACCGCATGGATATCGATACCATCGACGTGCTCGAAGCCGCTGGC ACCAAGTGGAACTTCTTACCTTTCCGCCCAGGCTTGGTTGGCGGCCACTGTATTGGTGTAGACCCTTACTACCTCACGCA CAAAGCCGAGCGCATGGGCTACAACCCCGAAGTTATTTTGGCTGGTCGTCGCATTAACGATTCCATGGGTGCCTATGTGG TGCAGCAGGTAATTCGCCAGCTAGCGCAAGCAGACAAGCCTATAAAAGGCGCCAAGGTTGCTGTTATGGGCCTAACCTTT AAAGAAGATTGCCCAGACCTGCGCAACTCTCGCGTTATTGACGTAATTAAAGAATGCCAAACCTGGGGCATAGAGCCGTT AGTGCACGACCCCATGGCTGACCCCGCCGAAGCACAGCACGAATACGGTGTACAGCTTGTAGGCGACGACGCAATTAAAA ACGTAGATGCACTTATTTTTACCGTGGCGCACAAGCATTACAAGCAGTGGAGCACCGAGCAAATTATTGCTCGCCTAGCA CCGGAAGGCTCTGTATTTGACGTTAAAGGAATGCTAAACCGCGAAGCGTTTGCCCAAGCCGGCACCACACTCTGGAGAAT GTAA Protein sequence : MHNRKISVIGLGYVGLPVAVAFGKSQQTIGFDINQGRVEELQKGTDRTLEVTSEELAQTDILFTCTPADLQKADFHIVAV PTPINDSKQPDLRPLIGASKTLGPQLKKGDIVVYESTVYPGATEEDCVPVLEAESGLKCGVDFFVGYSPERINPGDKEHT FTKITKVVSGQTPEVLEIVAAVYGSVVTAGVHKATSIKVAEAAKVIENTQRDLNIALMNELSVIFNRMDIDTIDVLEAAG TKWNFLPFRPGLVGGHCIGVDPYYLTHKAERMGYNPEVILAGRRINDSMGAYVVQQVIRQLAQADKPIKGAKVAVMGLTF KEDCPDLRNSRVIDVIKECQTWGIEPLVHDPMADPAEAQHEYGVQLVGDDAIKNVDALIFTVAHKHYKQWSTEQIIARLA PEGSVFDVKGMLNREAFAQAGTTLWRM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-127 | 62 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-107 | 56 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-107 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sde_0619 | YP_526093.1 | UDP-glucose/GDP-mannose dehydrogenase | VFG0431 | Protein | 8e-108 | 56 |
