Gene Information

Name : Sde_3838 (Sde_3838)
Accession : YP_529305.1
Strain : Saccharophagus degradans 2-40
Genome accession: NC_007912
Putative virulence/resistance : Resistance
Product : Phosphate regulon transcriptional regulatory protein phoB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4838000 - 4838704 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence :
ATGATTGAAAAGACGATTTTAGTAGTTGATGACGAGCCGCCAATTCGCGACATGTTACGTGTTGCACTGGAAATGGCAGA
ATATGCGGTATTGGAAGCCGGGGACGCACAACAAGCACACAGCTTAATTGTCGATAAAAAACCCGACCTCATTTTATTAG
ACTGGATGCTGCCAGGCACAAGCGGTATTGAATTGGCCCGCCGCCTTAAGCGCGACGAAGTTACCAGTGAAATTCCTATT
ATTATGCTTACCGCCAAAGGCGAAGAGGATAATAAAGTACAAGGCTTAGAGGTGGGTGCCGACGATTACATCACCAAGCC
CTTCTCACCACGTGAGCTAGTAGCGCGCCTAAAGGCCGTATTGCGTCGCACCGACTCAATGGGCATTAGCGAGCCTATTC
AAGTAGAAGGCCTGTGCCTAGACCCTATAAGCCACCGCGTAACCATTAGCGATATGCCTGTGCAAATGGGCCCTACAGAA
TACCGCCTACTAGAATTCTTTCTTACCCACCAAGAACGCGTTTACACCCGCAACCAATTGCTCGACCACGTGTGGGGCGG
CAATGTGTATGTAGAAGAACGCACGGTAGATGTTCACATTAGACGCTTGCGCAAAGCATTATCCCTTGAAGGCCACGACC
GTTTTATTCAAACTGTGCGTGGTGCGGGTTACCGCTTTTCTAATAAGGTCGCTCTAAAGGCCTAA

Protein sequence :
MIEKTILVVDDEPPIRDMLRVALEMAEYAVLEAGDAQQAHSLIVDKKPDLILLDWMLPGTSGIELARRLKRDEVTSEIPI
IMLTAKGEEDNKVQGLEVGADDYITKPFSPRELVARLKAVLRRTDSMGISEPIQVEGLCLDPISHRVTISDMPVQMGPTE
YRLLEFFLTHQERVYTRNQLLDHVWGGNVYVEERTVDVHIRRLRKALSLEGHDRFIQTVRGAGYRFSNKVALKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcsR1 YP_003782583.1 two-component system transcriptional regulatory protein Not tested PiCp 3 Protein 3e-35 41
mprA YP_005684640.1 response regulator mprA Not tested PiCp 3 Protein 3e-35 41
mprA YP_005680459.1 response regulator mprA Not tested PiCp 3 Protein 3e-35 41
mprA YP_005682550.1 response regulator mprA Not tested PiCp 3 Protein 3e-35 41
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 2e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sde_3838 YP_529305.1 Phosphate regulon transcriptional regulatory protein phoB HE999704.1.gene2815. Protein 2e-44 45
Sde_3838 YP_529305.1 Phosphate regulon transcriptional regulatory protein phoB NC_002695.1.916589.p Protein 2e-35 42
Sde_3838 YP_529305.1 Phosphate regulon transcriptional regulatory protein phoB NC_010410.6002989.p0 Protein 6e-38 41
Sde_3838 YP_529305.1 Phosphate regulon transcriptional regulatory protein phoB NC_007793.3914065.p0 Protein 4e-34 41
Sde_3838 YP_529305.1 Phosphate regulon transcriptional regulatory protein phoB NC_002758.1121390.p0 Protein 4e-34 41
Sde_3838 YP_529305.1 Phosphate regulon transcriptional regulatory protein phoB NC_010079.5776364.p0 Protein 4e-34 41
Sde_3838 YP_529305.1 Phosphate regulon transcriptional regulatory protein phoB NC_002952.2859858.p0 Protein 4e-34 41
Sde_3838 YP_529305.1 Phosphate regulon transcriptional regulatory protein phoB NC_007622.3794948.p0 Protein 4e-34 41
Sde_3838 YP_529305.1 Phosphate regulon transcriptional regulatory protein phoB NC_011595.7057856.p0 Protein 6e-38 41
Sde_3838 YP_529305.1 Phosphate regulon transcriptional regulatory protein phoB NC_003923.1003417.p0 Protein 4e-34 41
Sde_3838 YP_529305.1 Phosphate regulon transcriptional regulatory protein phoB NC_013450.8614146.p0 Protein 4e-34 41
Sde_3838 YP_529305.1 Phosphate regulon transcriptional regulatory protein phoB NC_002951.3238224.p0 Protein 4e-34 41
Sde_3838 YP_529305.1 Phosphate regulon transcriptional regulatory protein phoB AE000516.2.gene3505. Protein 5e-31 41
Sde_3838 YP_529305.1 Phosphate regulon transcriptional regulatory protein phoB BAC0039 Protein 3e-35 41
Sde_3838 YP_529305.1 Phosphate regulon transcriptional regulatory protein phoB CP001138.1.gene2239. Protein 2e-35 41
Sde_3838 YP_529305.1 Phosphate regulon transcriptional regulatory protein phoB CP000034.1.gene2186. Protein 3e-35 41
Sde_3838 YP_529305.1 Phosphate regulon transcriptional regulatory protein phoB CP001918.1.gene3444. Protein 2e-35 41
Sde_3838 YP_529305.1 Phosphate regulon transcriptional regulatory protein phoB BAC0596 Protein 2e-35 41