Gene Information

Name : Sde_3668 (Sde_3668)
Accession : YP_529135.1
Strain : Saccharophagus degradans 2-40
Genome accession: NC_007912
Putative virulence/resistance : Virulence
Product : Two-component response regulator AlgR
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 4650532 - 4651263 bp
Length : 732 bp
Strand : -
Note : -

DNA sequence : 
ATGCATATTCTAATTGTTGATGATGAGCCACTGGCAAGGTTGCGCCTGCAGCGACTTATTGATGCGCTGCCCGACTATAC
CGTGGTAGGTGAGGCTGCCAATGGCGACGAAGCTATAGAGGCCACCTTACGGCTCGACCCCGATATTGTGCTTACCGACA
TTCGTATGCCAGGCAAAGATGGCCTCGAAGCTGCTCACGTAATATCGGCTATGGAAGATCCACCCGCCTTAATTTTTTGC
ACCGCCTACGATGAATACGCGCTGCAGGCTTTCGAAACCCTTGCTGCGGGGTATTTGCTTAAACCTGTAAAAGAAGAGCA
GTTGCGCGCCGCGCTAGAAAAAGTAACGCGTACAACTAAAGTGCAAAAATCGGCGTTAAAGCAAGTGGAAGAAGGAGCCA
GCCGCCAGCATATAGCCGCAAAAACACGGCGCGGTACCGAGCTTATCCCAATAGACGATATTTACTGTTTTATCGCTGAC
CAAAAATACGTAACGGTATACCACGCCGAAGGGGAAACCCTTATCGACGATACCCTAAAAGAGCTAGAAGAAGAGTTTGC
CCAGCGCTTTGTGCGCATTCACCGCAATGCTCTGGTCGCGATTAAAGGCATAGTGGGCATGGAAAAAACCGCAGAAGGGC
AATACGCAGTGTGTATAAAAGATAGCGAATACCGCCCACTGGTAAGCCGTCGTCACCTTTCGGGCGTACGCGACTTACTT
AACCGTCTGTAG

Protein sequence : 
MHILIVDDEPLARLRLQRLIDALPDYTVVGEAANGDEAIEATLRLDPDIVLTDIRMPGKDGLEAAHVISAMEDPPALIFC
TAYDEYALQAFETLAAGYLLKPVKEEQLRAALEKVTRTTKVQKSALKQVEEGASRQHIAAKTRRGTELIPIDDIYCFIAD
QKYVTVYHAEGETLIDDTLKELEEEFAQRFVRIHRNALVAIKGIVGMEKTAEGQYAVCIKDSEYRPLVSRRHLSGVRDLL
NRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 4e-50 49
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 4e-50 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sde_3668 YP_529135.1 Two-component response regulator AlgR VFG0119 Protein 1e-58 53