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Name : Sde_3579 (Sde_3579) Accession : YP_529046.1 Strain : Saccharophagus degradans 2-40 Genome accession: NC_007912 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 4537735 - 4539246 bp Length : 1512 bp Strand : - Note : - DNA sequence : GTGATTGATGTTAACGAAGCAAACGAAATAGTCGAGGTTACAGAGCAAGACGAAGTGGTGATTAGCCGCACGCGCTTGCC GTTCTCGTTTGCGTCTGAGCACGGTGTGGTAATAGAAGACGGTTGTATATTGCACCGCTCCGATATTTCTGCGCCCATCC TGCTTGAGTTGCGCCGCCATATGGGGCGCCCACTTATTTTAAAGCAAGTGGATGAAGCCGAATTCAAATCGAAGCTCACC AAGTTGTATCAAAGTAACGACGGCGAAGCGCAACAAGCTGTTGACGAAATGGGTGCAGAGTTTGACCTTACCCAGCTCGC AGATGATATTTCTGACGATAGTGAATTGTTATCGGGCGACGGTGATGCGCCGGTTATTCGCTTAATTAACGCGGTGTTGT CGCAAGCGGTACAAGAGCAGGCGTCGGATATTCACGTCGAGCCCTATGAAGATCGCGTCTCTATTCGCTTCCGCGTGGAT GGTATTCTTAACGAAGTACTTTCCCCTAAGCCTGTGCTTGCCCCGGTATTGGTATCGCGCTTAAAAGTTATGGCGCGCTT GGATATTGCCGAAAAACGTATTCCGCAGGATGGTCGCATTACCGTTAAGTTAGCCGGTCACGCTGTGGATATTCGTGTTT CGACTATTCCATCTGCCCACGGTGAGCGCGTGGTATTGCGTCTGCTCGACCAAGCCGCAGGCCAATTGGGCTTACCGCAA TTGCGTATGCCTGAAGATGTACAAACCAATTTCGAAAAAGCACTGCGCAAACCGCACGGTATTATTTTGGTTACCGGCCC TACGGGTTCGGGTAAAACCACATCGCTTTATGCGGGCCTAAGTTATTTGAATACGCGCTCGCGCAATATTCTTACTATTG AAGACCCAATCGAGTATTTGTTGGCAGGTATTGGCCAAACACAAGTAAATACCAAAGTAGATATGACCTTCGCACGCGGG CTGCGGGCAATACTTCGTCAGGATCCCGATGTAGTCATGATCGGTGAGATTCGCGACCAAGAAACCGCGCAAATTGCTGT ACAGGCGAGTTTGACCGGTCACTTGGTGTTATCTACCTTGCACACCAACACCGCAATAGGTGCGGTAATGCGTTTGCAAG ATATGGGCGTAGAGCCCTTTTTGTTGTCATCCAGTTTAGAAGGCTTGATGGCGCAGCGTTTGGTGCGTTTGTTGTGCTCT AGCTGTAAAGAGCCGCACGAGGCCAGTGCATCGGAATCTCAGCGCTTGGGCGTGCCCGAGGGCAGTATTGTGTATCGCGC TGTTGGTTGTGATAAGTGCCATCAAACGGGTTACCGAGGCCGAACCGGTATTTACGAATTAATTCCAGTAGACGACACAT TGCGTCAACTTATTCACGAAGAAGTGGGTGAGCAGGCTATGTTAGCCCATGCGCGTAAAACCGTGCGCTCTATCGATCAA GACGGTCGAGAAAAAGTGCTGCAGGGTATGACCAGTGTGGAAGAAGTACTGCGCGTTACCGCGCTATCTTAA Protein sequence : MIDVNEANEIVEVTEQDEVVISRTRLPFSFASEHGVVIEDGCILHRSDISAPILLELRRHMGRPLILKQVDEAEFKSKLT KLYQSNDGEAQQAVDEMGAEFDLTQLADDISDDSELLSGDGDAPVIRLINAVLSQAVQEQASDIHVEPYEDRVSIRFRVD GILNEVLSPKPVLAPVLVSRLKVMARLDIAEKRIPQDGRITVKLAGHAVDIRVSTIPSAHGERVVLRLLDQAAGQLGLPQ LRMPEDVQTNFEKALRKPHGIILVTGPTGSGKTTSLYAGLSYLNTRSRNILTIEDPIEYLLAGIGQTQVNTKVDMTFARG LRAILRQDPDVVMIGEIRDQETAQIAVQASLTGHLVLSTLHTNTAIGAVMRLQDMGVEPFLLSSSLEGLMAQRLVRLLCS SCKEPHEASASESQRLGVPEGSIVYRAVGCDKCHQTGYRGRTGIYELIPVDDTLRQLIHEEVGEQAMLAHARKTVRSIDQ DGREKVLQGMTSVEEVLRVTALS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-129 | 57 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-129 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sde_3579 | YP_529046.1 | type II secretion system protein E | VFG0182 | Protein | 3e-136 | 61 |
| Sde_3579 | YP_529046.1 | type II secretion system protein E | VFG1876 | Protein | 5e-125 | 58 |
| Sde_3579 | YP_529046.1 | type II secretion system protein E | VFG2048 | Protein | 5e-130 | 57 |
| Sde_3579 | YP_529046.1 | type II secretion system protein E | VFG2426 | Protein | 9e-75 | 47 |
