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Name : Sde_3578 (Sde_3578) Accession : YP_529045.1 Strain : Saccharophagus degradans 2-40 Genome accession: NC_007912 Putative virulence/resistance : Virulence Product : General secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 4536478 - 4537713 bp Length : 1236 bp Strand : - Note : - DNA sequence : ATGGGCGCATATACATATCAGGCTCTGAATGCCAAAGGTAAAAAAGTAAAAGGCATTATCGAGGGCGACTCTGAGCGTCA CGTCCGCACGCAGTTGCGCGCACAATCGCTAAAGCCTCTAGATGTAAAATCCTCCTCTGGGCGTAAAAGCTCGTCAGAGA AAACGGCCAAAAGCCACAGCAGTTTTTTTGGTGGCCCGCGTTTAGGCTACCGCGATGTATCGCTTGTTACGCGTCAATTG GCGTCGCTGGTGCAGTCGGGGTTGCCGCTCGATGAAGTGCTGCAATCTACAGCCAAACAATCGCGTAAGCCTGTTGCCAA AAGTGTATTACTGCAAGTTAGGGCGCGTGTATTAGAAGGTATAAGTCTGCATCAAGCCATGGCCGAAGTGCCAAGAGTGT TTGATAACTTATATCGGGCAATGGTGCGCGCCGGTGAATCCTCTGGCTTTTTAGGACCGGTGTTAGAGCAGCTTGCTGAA TACACAGAGCGCAGCCAAGAAACACGACAAAAACTTCAAATGGCCATGGTGTATCCCGTGGTTATGTTGGTTGTTAGCGT ATGTGTTGTAACCGTACTTATGGTTAAAGTGGTACCGCAGTTAACGCAATTGTTTGAGCGCGGTAAACACGAACTGCCAG GTATTACCAAGGTTTTGGTTGCCACCAGTAATTTTATGGTGGACTACGGCATATTCTTATTTGCCGGTGTGACGGCAATA TTTATTTTTATTCAGTGGTTACTTAAAAACGATGCGCGCAAGCTTAAATGGCATCGCACTGTATTAAAGTTACCGGTGAT TGGCTCGGTGGTACTGTTGGGCGAAACTGCTCGCTATGCCTCAACCTTAGGTTTGCTTGCGCACAGCGGGGTGCCGCTGT TAGAAGCGCTGCGTATTGCTACTCAAGTACTGTCTAACCGCGAAATGAAACTCGCTAGCGAGCAGGTGTGTATTGCCGTG CAAGAAGGTGGCTCGTTAAGTCGCGCGTTAGATCAGGCTAAAGTATTCCCTCCCTTGTTAGTGCAAATGGCGGCGAGTGG TGAGTCTAACGGCAAGCTAGATGAGCAATTACTGTACGCTGCGCGCAACCAAGAGCGCGAGTTGGAGTTTTCTATTAATA CTGCAATGGGCCTGTTGCAACCGGCAATTGTGTTGTTGCTAGCGGGTATTGTTATTTTTATCGTAATGGCAATTCTACTG CCTATATTTGCGATGAACGACATGATTGCAGGTTAG Protein sequence : MGAYTYQALNAKGKKVKGIIEGDSERHVRTQLRAQSLKPLDVKSSSGRKSSSEKTAKSHSSFFGGPRLGYRDVSLVTRQL ASLVQSGLPLDEVLQSTAKQSRKPVAKSVLLQVRARVLEGISLHQAMAEVPRVFDNLYRAMVRAGESSGFLGPVLEQLAE YTERSQETRQKLQMAMVYPVVMLVVSVCVVTVLMVKVVPQLTQLFERGKHELPGITKVLVATSNFMVDYGIFLFAGVTAI FIFIQWLLKNDARKLKWHRTVLKLPVIGSVVLLGETARYASTLGLLAHSGVPLLEALRIATQVLSNREMKLASEQVCIAV QEGGSLSRALDQAKVFPPLLVQMAASGESNGKLDEQLLYAARNQERELEFSINTAMGLLQPAIVLLLAGIVIFIVMAILL PIFAMNDMIAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 2e-56 | 42 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-56 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sde_3578 | YP_529045.1 | General secretion pathway protein F | VFG0181 | Protein | 4e-67 | 43 |
| Sde_3578 | YP_529045.1 | General secretion pathway protein F | VFG2049 | Protein | 2e-56 | 43 |
