Gene Information

Name : Sde_3521 (Sde_3521)
Accession : YP_528988.1
Strain : Saccharophagus degradans 2-40
Genome accession: NC_007912
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 4475769 - 4476530 bp
Length : 762 bp
Strand : +
Note : -

DNA sequence :
ATGGCAGACACAAAATCAAACAAAGCTGTGCTAATTACCGGGGGCAGTCGCGGCATTGGTCGCGCCATAGCTATACATGC
AGCCAAAGCCAGCTACGATATTATTTTTAGCTATCGCACCAATCTTGATGCAGCAACAAGCCTGTACGACGAGCTTCATG
CACTAGGTGCCAAAGCCCACGGCGTGCAAGCCGATGTGAGTACCGAAGCGGGAGTAATACGCCTGTTTCAATTTGCTGAC
GAAGCAACAGGTAGGATCGATTCACTAGTAAACAATGCCGGCAATGTAGCGCCAAGCAGTCGCGTAGATAGCTTTAGCGC
AGCGCGAGTGAACGATTTATTAGCCCTTAACGTGCTGGGGCCAATTTTATGTTGCCGCGAAGCCGTTAAGCGCATGTCTA
CACTGTACGGCGGGCGCGGCGGCAATATTGTTAACATATCATCCATAGCGGCCTCGCTTGGCTCGCCCGGCGAATATGTA
GACTACGCGGCAACCAAAGCGGCTATCGATACGCTCACCAAAGGCCTAGCGAAAGAAGTCGCCAACGAAGGCATTCGCGT
AAATGCAGTACGCCCCGGGATAATAGATACCGACTTACACGCCAATTCAGGCGATAGAAAACGCCCATTTAAACTACAAT
CACTTATCCCCATGCAAAAGGTAGGTACGGTGGACGACATTGCGCAAGCAGTGCTGTGGCTGCTTTCCGACGAAGCCAGC
TATATTACTGGCAGCCTATTGGATGTTTCTGGTGGCCGTTAA

Protein sequence :
MADTKSNKAVLITGGSRGIGRAIAIHAAKASYDIIFSYRTNLDAATSLYDELHALGAKAHGVQADVSTEAGVIRLFQFAD
EATGRIDSLVNNAGNVAPSSRVDSFSAARVNDLLALNVLGPILCCREAVKRMSTLYGGRGGNIVNISSIAASLGSPGEYV
DYAATKAAIDTLTKGLAKEVANEGIRVNAVRPGIIDTDLHANSGDRKRPFKLQSLIPMQKVGTVDDIAQAVLWLLSDEAS
YITGSLLDVSGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 1e-48 52
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 1e-48 50