Gene Information

Name : ribE (Sde_3457)
Accession : YP_528924.1
Strain : Saccharophagus degradans 2-40
Genome accession: NC_007912
Putative virulence/resistance : Unknown
Product : Riboflavin synthase, alpha subunit RibE
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0307
EC number : 2.5.1.9
Position : 4398109 - 4398771 bp
Length : 663 bp
Strand : -
Note : Riboflavin synthase is a bifunctional enzyme complex catalyzing the formation of riboflavin from 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione and L-3,4-dihydrohy-2-butanone-4-phosphate via 6,7-dimethyl-8-lumazine.

DNA sequence :
ATGTTTACCGGTATTGTTGAAGCCAAAGGCACCATAGCCAAACTAGAGCCGCGCGACGGCGATGTGCGGTTGTGGGTAAC
CGCCCCCGATCTCGACTACAGCGATGTAGCTTTGGGTGACTCGATAGCCACCAATGGCGTGTGTCTAACCGCTGTGCAGT
TGCCGGGTAACGGCTTTGCTGCGGATGTATCGCGCGAAACCTTAAGCTTAACTACCTTGGTAAATTGGCAGCCCGGCACT
GTGGTTAACCTAGAAAAAGCACTTACCCCGCAAACCCGCTTGGGGGGGCATATAGTAAGTGGCCATGTAGATGGCGTAGG
GGAAGTGGTGTCGCGTCACCCAGATGCGCGCTCGGAGCGATTTACTATTCGCGCCCCTAAAGAATTGGCGAAATACATTG
CTCACAAGGGGTCTATAACCGTCGACGGCACCAGTCTTACCGTAAATGCCGTAAATGGTGATTTATTCGAGCTGAATATT
GTGCCCCATACGCTGCAATGGACCATAATTGATAGTTATACCGCGGGCACCAAAGTAAATTTAGAAGTGGACGTAATAGC
CCGCTACTTAGAGCGCTTACTGCTAGGCGACAAGGCTGCCGAGCCCAATGCGCAAAGCGAGATGACCGTACAGTTTTTAG
CGGAAAACGGCTATTTAAAATAA

Protein sequence :
MFTGIVEAKGTIAKLEPRDGDVRLWVTAPDLDYSDVALGDSIATNGVCLTAVQLPGNGFAADVSRETLSLTTLVNWQPGT
VVNLEKALTPQTRLGGHIVSGHVDGVGEVVSRHPDARSERFTIRAPKELAKYIAHKGSITVDGTSLTVNAVNGDLFELNI
VPHTLQWTIIDSYTAGTKVNLEVDVIARYLERLLLGDKAAEPNAQSEMTVQFLAENGYLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00291 YP_008207756.1 Riboflavin synthase alpha chain Not tested AbaR25 Protein 2e-55 60
BJAB0868_00295 YP_008211621.1 Riboflavin synthase alpha chain Not tested AbaR26 Protein 2e-55 60