Gene Information

Name : Sde_3445 (Sde_3445)
Accession : YP_528912.1
Strain : Saccharophagus degradans 2-40
Genome accession: NC_007912
Putative virulence/resistance : Resistance
Product : ABC transporter related
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 4383161 - 4383841 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGATTAGCACCCACAACCTTTGCCACCAAGTACCTATTCACGAAAGCGAGCTCGCTTTACTAAAAAGCATCGATTTGAA
TATTTTAAAAGGTGAATCTGTTGCCATTGTGGGCGCATCTGGCTCGGGTAAATCCACTCTGCTTACCATGCTTGCAGGGT
TAGATACGCCAACATCGGGCAATATTGTTATCGATTCGCAAGATATTACTCAATTAGACGAAGAACAGCGGGCAAAAGTT
CGCGCAGATTACATTTCTTTTGTTTTTCAAAACTTTCAATTATTAGGCAGTTTAACCGCACTAGAGAACGTAATGCTGCC
ATTGGAAGTGCGCGGTAACGCAGACCCTTTAACCAAAGCCAGCCAGTATTTACAGCGGGTGGGCCTAGGTAAGCGCTTAA
CCCACTACCCTAAGCAGCTATCTGGCGGTGAACAACAACGCGTAGCGCTAGCACGTGCTTTTGCTTGCGAGGCACCATTA
TTGTTTGCCGATGAACCCACTGGTAATTTAGATTCGGCCACAGGCCGCGCCATTGCCGATTTATTATTCGAACTAAACGG
TGAAAGCAATACTACATTAATATTGGTTACTCACGACGACAAACTCGCGCAGCGCTGCCAGCGCCAATTGCGCATGGAAG
AAGGTCGCATTAGCGAAATTACCACAGCCCATTTCGCTTAG

Protein sequence : 
MISTHNLCHQVPIHESELALLKSIDLNILKGESVAIVGASGSGKSTLLTMLAGLDTPTSGNIVIDSQDITQLDEEQRAKV
RADYISFVFQNFQLLGSLTALENVMLPLEVRGNADPLTKASQYLQRVGLGKRLTHYPKQLSGGEQQRVALARAFACEAPL
LFADEPTGNLDSATGRAIADLLFELNGESNTTLILVTHDDKLAQRCQRQLRMEEGRISEITTAHFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-30 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-30 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-30 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 7e-24 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sde_3445 YP_528912.1 ABC transporter related NC_012469.1.7686878. Protein 1e-38 48
Sde_3445 YP_528912.1 ABC transporter related NC_008702.1.4606598. Protein 6e-35 45
Sde_3445 YP_528912.1 ABC transporter related NC_012469.1.7686946. Protein 1e-23 41
Sde_3445 YP_528912.1 ABC transporter related NC_012469.1.7685735. Protein 1e-34 41