|
Name : Sde_3308 (Sde_3308) Accession : YP_528775.1 Strain : Saccharophagus degradans 2-40 Genome accession: NC_007912 Putative virulence/resistance : Unknown Product : leucyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0495 EC number : 6.1.1.4 Position : 4218800 - 4221259 bp Length : 2460 bp Strand : + Note : - DNA sequence : ATGAACGAGTATTACCAGCCGTCCGAGATCGAGGCACAAGCACAGAAATACTGGGAAGAGAACAAAAGCTTCAACGTTAC TGAAGATCCCACCAAAGAAAAGTTTTACTGCTTGGCCATGTTCCCCTACCCCAGCGGTCGTTTGCATATGGGGCATGTAC GCAACTACACCATCAGCGACGTAATATCTCGGTTCCACCGCATGCAAGGCAAAAACGTTTTGCACCCCATGGGTTGGGAT GCCTTCGGTTTACCGGCGGAAAACGCAGCCATTAAAAACAACACTGCGCCGGCAAAATGGACCTACTCCAACACAGACTA CATGCGCAAACAGCTAACCGAATTGGGTTTTGGTTTTGACTGGTCACGCGAAGTAACTACCTGTAAACCCGACTACTACA AATGGGAGCAGTGGTTCTTCACCCGCTTATATGAAAAAGGGTTGGCCTACAAAAAAGTTGCATCGGTTAACTGGTGCCCC AACGACCAAACCGTATTGGCCAACGAGCAAGTGGTAGACGGCCAATGCTGGCGCTGCGACACAGCCGTAGAACGCAAAGA GATTCCACAGTGGTTTATTCGCATCACCGACTACGCCGAAGAGCTATTAGCCGATTTAGATAAGCTGCCAAACTGGCCCG AGCAAGTAAAAACTATGCAACGCAATTGGATTGGTAAAAGCCAAGGCGTAGAAATGCGCTTTGATTTAGCCAACCCCATA GCAGGTACCACCGGCTTTGATGTGTATACCACCCGCCCCGACACCTTAATGGGCGTGACATACGTAAGCCTTGCCGCCGA GCACCCCATTGCCAAAGCACTGGCAGAAACAAACCCCGCGTTGGCTGCATTTATTCAAGAGTGCAAAGTGCAATCGGTGG CAGAGGCCGACATGGCCAACATGGAGAAAAAAGGCATAGACACGGGCATAAAAGCCAAGCACCCCATTACCGGCGACGAA GTGTCTGTGTGGGTGGCCAACTATGTGCTTATGGATTACGGCTCTGGTGCGGTAATGGCTGTGCCTGCACACGACCAGCG CGACTGGGAATTTGCCAAAAAATACGATCTAGAAATTAAACAAGTTATCGCCCCCGAAGACGGCAGCGACATAGACCTCA CCAAAGAAGCCTTTGTCGACAAAGGCGTGCTAGTGAACAGCGGCGAATACGACGGCTTAAACTTTAACGCCGCGTTTGAA GCTATTTCGCAAACACTGCAAGCGGCCAACAAAGGCAAGGTAACCACCAACTTTCGTTTACGCGACTGGGGTGTTTCCCG CCAGCGTTACTGGGGTTCACCTATTCCTATTTTTAATTTGCCCGACGGTGGCGTTATTCCCGTGCCGGCAGATCGTCTGC CAGTGTTGCTACCAGAAGACGTGCAAATGGATGGCGTACAATCGCCAATCAAAGCAGACAAAGAATGGTGCAAAGCCGAG CTAAACGGCCAAGCGGTTGAACACGAAACCGATACCTTCGACACCTTTATGGAGTCGTCTTGGTATTACGCCCGCTACAC CAGCCCCAACGCCGACAGCATGCTCGACCCAGACAAAGCCAACTACTGGCTGCCGGTGGACCAGTATGTGGGTGGTATTG AACACGCTATTTTGCACCTGTTGTACGCGCGCTTTTTCCACAAGCTTATGCGCGACGAAGGCTTGGTGGAATGCGACGAG CCGTTTGAGCGTTTGCTTTGTCAGGGCATGGTATTAAAAGACGGCACTAAAATGTCTAAGTCGAAGGGCAACACCGTCGA CCCAGAAGACCTAATTAAAACCTACGGCGCCGATACCGTTCGCCTGTTTTCTATGTTCGCAGCGCCACCAGAGCAATCGC TAGAGTGGACTGACTCGGGTGTAGAGGGTGCATTCCGCTTTTTGAAAAAGCTATGGAAAGCCGTTGCCAGCCACCTAGAA GCAGGCAGCGCAGGCGAGATAGACGCAAACAGCTTAGACGAGCAACAAAAAGCGCTGCGCCGTAAAACCCACGAAACCAT TAGCAAGGTAAGCGACGACTACGGCCGCCGCCAAACCTTTAACACCGCTATTGCCGCGGTAATGGAATTACTAAACGAAA TTACCCGCAGTGCTGACCGCAGCACACCAAACGGGTTAGCGGTTGAGCGCGAAGCGCTAGAAGCAGCAACGTTATTGCTA GCGCCAATTGTGCCGCACGCCTGTCACGCACTGTGGCAAGCCTTTGGCAACGAAGTAGCGGTGCTAGATGCGCCTTGGCC AACCGTAGACGAAGCCGCACTAGTAAAAGACACCATTACCATTGTGGCCCAGGTAAACGGCAAAGTGCGCGCTAAACTCG ATGCACCCGCCAACGCAGATAAAGACGCACTGGAAAAAATCGCCCTAGCCGATGAAAGTGTTTTAAAACACATAGACGGC AAGATGATTCGCAAAGTGATTGTTGTGCCCGGCAAGCTGGTTAACATTGTTGCCAACTAA Protein sequence : MNEYYQPSEIEAQAQKYWEENKSFNVTEDPTKEKFYCLAMFPYPSGRLHMGHVRNYTISDVISRFHRMQGKNVLHPMGWD AFGLPAENAAIKNNTAPAKWTYSNTDYMRKQLTELGFGFDWSREVTTCKPDYYKWEQWFFTRLYEKGLAYKKVASVNWCP NDQTVLANEQVVDGQCWRCDTAVERKEIPQWFIRITDYAEELLADLDKLPNWPEQVKTMQRNWIGKSQGVEMRFDLANPI AGTTGFDVYTTRPDTLMGVTYVSLAAEHPIAKALAETNPALAAFIQECKVQSVAEADMANMEKKGIDTGIKAKHPITGDE VSVWVANYVLMDYGSGAVMAVPAHDQRDWEFAKKYDLEIKQVIAPEDGSDIDLTKEAFVDKGVLVNSGEYDGLNFNAAFE AISQTLQAANKGKVTTNFRLRDWGVSRQRYWGSPIPIFNLPDGGVIPVPADRLPVLLPEDVQMDGVQSPIKADKEWCKAE LNGQAVEHETDTFDTFMESSWYYARYTSPNADSMLDPDKANYWLPVDQYVGGIEHAILHLLYARFFHKLMRDEGLVECDE PFERLLCQGMVLKDGTKMSKSKGNTVDPEDLIKTYGADTVRLFSMFAAPPEQSLEWTDSGVEGAFRFLKKLWKAVASHLE AGSAGEIDANSLDEQQKALRRKTHETISKVSDDYGRRQTFNTAIAAVMELLNEITRSADRSTPNGLAVEREALEAATLLL APIVPHACHALWQAFGNEVAVLDAPWPTVDEAALVKDTITIVAQVNGKVRAKLDAPANADKDALEKIALADESVLKHIDG KMIRKVIVVPGKLVNIVAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| leuS | YP_281511.2 | leucyl-tRNA synthetase | Not tested | Not named | Protein | 2e-155 | 42 |
